Bioconductor Genomicinteractions

Showing : genomicinteractions • reset

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952

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InteractionSet subsetByOverlaps GenomicInteractions

2.6 years ago Laureano Tomás-Daza ▴ 10

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969

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

4.6 years ago koushik • 0

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2.5k

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diffHic GenomicInteractions edgeR HiC cooler

updated 5.4 years ago by Aaron Lun ★ 29k • written 5.4 years ago by Marco Blanchette ▴ 30

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1.7k

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duplicate GenomicInteractions

5.7 years ago dogancan • 0

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1.3k

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GenomicInteractions

5.8 years ago chang.jiaming • 0

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1.8k

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GenomicInteractions gviz

updated 5.9 years ago by liz.ingsimmons ▴ 140 • written 5.9 years ago by Marco Blanchette ▴ 30

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1.2k

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genomicInteractions annotation

updated 6.6 years ago by liz.ingsimmons ▴ 140 • written 6.6 years ago by ls760 • 0

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2.0k

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GenomicInteractions Gviz

updated 6.7 years ago by liz.ingsimmons ▴ 140 • written 6.7 years ago by Nik dAK ▴ 10

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1.8k

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genomicinteractions gviz interactionset

updated 7.1 years ago by liz.ingsimmons ▴ 140 • written 7.1 years ago by ferbecneu • 0

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2.0k

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genomicinteractions

8.4 years ago sarvesh.nikumbh ▴ 10

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3.6k

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gviz genomicinteractions

9.8 years ago enricoferrero ▴ 680

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1.5k

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genomicinteractions GRanges

updated 9.9 years ago by liz.ingsimmons ▴ 140 • written 9.9 years ago by tangming2005 ▴ 200

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2.8k

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GenomicInteractions

updated 10.1 years ago by Malcolm Perry ▴ 40 • written 10.1 years ago by tangming2005 ▴ 200

13 results • Page 1 of 1

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Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0

Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …

Comment: limpa analysis advice by Gordon Smyth 53k

I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…

Answer: Confirm that OpenStats will not be archived (pryr dependency) by shepherl 4.3k

As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…

Comment: Lowly expressed genes reported as significant when using lfcThreshold in DESeq by Michael Love 43k

Yes, I find that the LFC shrinkage and its corresponding stat `svalue` if you use lfcShrink with a threshold often returns more reliable ge…

Votes

Comment: limpa analysis advice

C: AnnotationForge makeOrgPackage rsqlite_send_query error

Answer: Limpa Pipeline Order

Answer: Array weights in dpcDE

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