Bioconductor Genomicinteractions

Showing : genomicinteractions • reset

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890

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InteractionSet subsetByOverlaps GenomicInteractions

2.3 years ago Laureano Tomás-Daza ▴ 10

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910

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

4.3 years ago koushik • 0

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2.2k

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diffHic GenomicInteractions edgeR HiC cooler

updated 5.2 years ago by Aaron Lun ★ 29k • written 5.2 years ago by Marco Blanchette ▴ 30

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1.6k

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duplicate GenomicInteractions

5.5 years ago dogancan • 0

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GenomicInteractions

5.6 years ago chang.jiaming • 0

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1.7k

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GenomicInteractions gviz

updated 5.7 years ago by liz.ingsimmons ▴ 140 • written 5.7 years ago by Marco Blanchette ▴ 30

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1.2k

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genomicInteractions annotation

updated 6.4 years ago by liz.ingsimmons ▴ 140 • written 6.4 years ago by ls760 • 0

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1.9k

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GenomicInteractions Gviz

updated 6.5 years ago by liz.ingsimmons ▴ 140 • written 6.5 years ago by Nik dAK ▴ 10

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1.7k

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genomicinteractions gviz interactionset

updated 6.9 years ago by liz.ingsimmons ▴ 140 • written 6.9 years ago by ferbecneu • 0

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1.9k

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genomicinteractions

8.1 years ago sarvesh.nikumbh ▴ 10

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3.4k

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gviz genomicinteractions

9.6 years ago enricoferrero ▴ 680

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1.5k

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genomicinteractions GRanges

updated 9.7 years ago by liz.ingsimmons ▴ 140 • written 9.7 years ago by tangming2005 ▴ 200

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2.7k

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GenomicInteractions

updated 9.8 years ago by Malcolm Perry ▴ 40 • written 9.9 years ago by tangming2005 ▴ 200

13 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0

Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…

Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0

thanks for sharing! [slope 2][1] [1]: https://slope2.online

Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40