Showing : ggplot2 • reset
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displaying UP, DOWN, and NON-regulated genes
ggplot2
10.0 years ago Bogdan ▴ 670
1
vote
1
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1.9k
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ggplot same data, different plots
ggplot2 ggplot plot
updated 10.0 years ago by 68k • written 10.0 years ago by ▴ 50
0
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2
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2.2k
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error when using seeFastqPlot
systempiper seeFastqPlot software error ggplot2 geom_histogram
updated 10.0 years ago by ★ 1.7k • written 10.0 years ago by • 0
1
vote
4
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3.1k
views
Cannot get ggbio autoplot to run successfully on R 3.2 (3.2.2 or 3.2.3)
ggbio ggplot2 autoplot bioconductor gene models
updated 10.0 years ago by ▴ 10 • written 10.1 years ago by ▴ 10
1
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1
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2.3k
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ggplot2 functions not inheriting?
ggplot2
10.1 years ago andrew.j.skelton73 ▴ 370
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0
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1.2k
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line colors plotRangesLinkedToData
ggbio ggplot2 dexseq
10.1 years ago Alejandro Reyes ★ 1.9k
0
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1
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1.8k
views
ggbio package only works with h19 genome
ggbio ggplot2
updated 10.3 years ago by 68k • written 10.3 years ago by ▴ 10
3
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4
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3.8k
views
Bioconductor vignette on Time course experiments only describes how to plot the the gene with the smallest p-value. How can I plot specific genes of …
timecourse time course rna-seq deseq2 ggplot2
10.4 years ago moldach ▴ 20
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2
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3.8k
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barplot with ggplot2 for gene expression
ggplot2 barplot gene expression gene expression
updated 10.5 years ago by 68k • written 10.5 years ago by ▴ 130
0
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1
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2.0k
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Newbie - Adding Labels to Individual Genes with ggbio?
r ggbio ggplot2 dnaseq genomicranges
updated 10.6 years ago by ▴ 130 • written 10.6 years ago by • 0
1
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2
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3.6k
views
gene expression visualization: lineplot with ggplot2
ggplot2 lineplot visualization
updated 10.7 years ago by ▴ 180 • written 10.7 years ago by ▴ 130
2
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2
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3.7k
views
cummeRbund change point size in volcano plot
cummerbund ggplot2 size r volcanoplot
updated 11.2 years ago by 68k • written 11.2 years ago by ▴ 20
62 results • Page 2 of 2
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Comment: Chip Seq Analysis of RNA Polymerase 2 by Tikaaaq2c • 0
Without proper scaling or an enrichment check , Pol 2 peaks can appear flat against the background. If the data remains noisy, you might w…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by Tikaaaq2c • 0
Organizing complex transcripts requires the same discipline as managing a digital library on a learning platform. Many researchers use a [S…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
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Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
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