Bioconductor Goexpress

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goexpress gopro

8.8 years ago Bogdan ▴ 670

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GOexpress deseq2 expressionset

10.2 years ago martin.hoelzer ▴ 20

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gene ontology goexpress

updated 8.9 years ago by kevin.rue ▴ 350 • written 8.9 years ago by mforde84 ▴ 20

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goexpress

updated 10.2 years ago by kevin.rue ▴ 350 • written 10.2 years ago by willj ▴ 30

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software error goexpress

updated 10.2 years ago by kevin.rue ▴ 350 • written 10.2 years ago by kcamnairb ▴ 10

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2.0k

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GOexpress

updated 3.1 years ago by kevin.rue ▴ 350 • written 3.1 years ago by grolo • 0

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3.3k

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goexpress

updated 9.8 years ago by kevin.rue ▴ 350 • written 9.8 years ago by martin.hoelzer ▴ 20

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GOexpress subset_scores <0 rows>

7.9 years ago sina.zboron • 0

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GOexpress heatmap gene ontology plot

updated 6.2 years ago by kevin.rue ▴ 350 • written 6.2 years ago by Antonio Campos • 0

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goexpress ExpressionSet GO_analyse

6.3 years ago rezashiralmohammad • 0

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1.6k

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RNA-seq transcriptomics gene ontology gene expression GOexpress

updated 5.9 years ago by kevin.rue ▴ 350 • written 5.9 years ago by atorson • 0

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GOexpress GO.db GOSemSim

3.1 years ago Chruut • 0

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722

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GOexpress

3.8 years ago jms2520 ▴ 10

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topgo biomart gene ontology goexpress pathway analysis

updated 9.6 years ago by kevin.rue ▴ 350 • written 9.6 years ago by Darya Vanichkina ▴ 130

14 results • Page 1 of 1

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Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0

For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

BTW, I tested with no issue on MacOS ARM on our previous github issue.

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All

Popular Question to Lluís Revilla Sancho ▴ 760

Popular Question to James W. MacDonald 68k