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goexpress
•
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0
votes
2
replies
1.1k
views
Can't install GO.db
GOexpress
GO.db
GOSemSim
12 months ago
Chruut
• 0
2
votes
8
replies
842
views
Errors when plotting data using heatmap_GO (GOexpress)
GOexpress
updated 13 months ago by
kevin.rue
▴ 320 • written 13 months ago by
grolo
• 0
0
votes
0
replies
379
views
GOexpress pvalue and gene sets
GOexpress
22 months ago
jms2520
• 0
0
votes
4
replies
909
views
GOexpress - Error when plotting expression data
RNA-seq
transcriptomics
gene ontology
gene expression
GOexpress
updated 3.9 years ago by
kevin.rue
▴ 320 • written 3.9 years ago by
atorson
• 0
1
vote
2
replies
1.1k
views
Obtain the first gene expression heatmaps from GOexpress package gene ontology enrichment analysis results
GOexpress
heatmap
gene ontology
plot
updated 4.2 years ago by
kevin.rue
▴ 320 • written 4.2 years ago by
Antonio Campos
• 0
0
votes
2
replies
859
views
'GO_analyse' function error
goexpress
ExpressionSet
GO_analyse
4.3 years ago
rezashiralmohammad
• 0
2
votes
4
replies
1.1k
views
GOexpress - Trouble with subset_scores result (<0 rows>)
GOexpress
subset_scores
<0 rows>
5.9 years ago
sina.zboron
• 0
9
votes
8
replies
3.4k
views
heatmap of genes based on enriched GO categories
goexpress
gopro
6.8 years ago
Bogdan
▴ 670
5
votes
4
replies
1.4k
views
Contrasts in GOexpress analysis?
gene ontology
goexpress
updated 6.9 years ago by
kevin.rue
▴ 320 • written 6.9 years ago by
mforde84
▴ 20
0
votes
3
replies
3.4k
views
Gene ontology and pathway analysis in R - replicate ToppGene features; best strategy for getting annotations?
topgo
biomart
gene ontology
goexpress
pathway analysis
updated 7.6 years ago by
kevin.rue
▴ 320 • written 7.6 years ago by
Darya Vanichkina
▴ 120
2
votes
6
replies
2.5k
views
GOexpress: GO_analyse function throws Error: Space required after the Public Identifier
goexpress
updated 7.7 years ago by
kevin.rue
▴ 320 • written 7.7 years ago by
martin.hoelzer
▴ 20
3
votes
2
replies
1.2k
views
Is it common to get all 0 values when running the randomForest step in GOexpress?
goexpress
updated 8.1 years ago by
kevin.rue
▴ 320 • written 8.1 years ago by
willj
▴ 30
3
votes
6
replies
1.6k
views
GOexpress error at pValue_GO step
software error
goexpress
updated 8.1 years ago by
kevin.rue
▴ 320 • written 8.1 years ago by
kcamnairb
▴ 10
6
votes
7
replies
3.5k
views
GOexpress: use DESeq2 data object as input
GOexpress
deseq2
expressionset
8.1 years ago
martin.hoelzer
▴ 20
14 results • Page
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Comment: Java error while running HiCDC overview code
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Thrilling, reminiscent are the emotions when playing the game Headle, a great game that helps you regain energy after a long, tiring, busy …
Comment: DiffBind getting Fold values of near 0
by
ATpoint
★ 3.6k
Almost certainly data are noisy and DESeq2 (which is used internally) shrinks the fold changes towards zero, because the naive fold changes…
Comment: metagenomeSeq 1.16.0: unique features give NA's for logFC / p-val?
by
liqiong464
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Hey, I encountered similiar problems now as handibles metentioned. But it seems a bit different somehow. I have 51 samples divided…
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Because it is so clever and unique, I believe that many more ideas will be inspired by and borrowed from your original concept. [five night…
Comment: How does Deseq2 deal with the row with zero when calculating size factors
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Thank you for sharing. I've read a great deal on relevant topics! Unlike other articles, yours really made an impression on me. I hope you'…
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Comment: Ensembl down???
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
Comment: Ensembl down???
Answer: SingleR annotation of several slots/patients
Answer: List of Deprecated Packages for Bioc3.18
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