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GOexpress
•
reset
0
votes
2
replies
3.5k
views
Can't install GO.db
GOexpress
GO.db
GOSemSim
3.3 years ago
Chruut
• 0
2
votes
8
replies
2.3k
views
Errors when plotting data using heatmap_GO (GOexpress)
GOexpress
updated 3.3 years ago by
kevin.rue
▴ 350 • written 3.3 years ago by
grolo
• 0
0
votes
0
replies
750
views
GOexpress pvalue and gene sets
GOexpress
4.0 years ago
jms2520
▴ 10
0
votes
4
replies
1.7k
views
GOexpress - Error when plotting expression data
RNA-seq
transcriptomics
gene ontology
gene expression
GOexpress
updated 6.1 years ago by
kevin.rue
▴ 350 • written 6.1 years ago by
atorson
• 0
1
vote
2
replies
2.0k
views
Obtain the first gene expression heatmaps from GOexpress package gene ontology enrichment analysis results
GOexpress
heatmap
gene ontology
plot
updated 6.4 years ago by
kevin.rue
▴ 350 • written 6.4 years ago by
Antonio Campos
• 0
0
votes
2
replies
1.6k
views
'GO_analyse' function error
goexpress
ExpressionSet
GO_analyse
6.5 years ago
rezashiralmohammad
• 0
2
votes
4
replies
1.9k
views
GOexpress - Trouble with subset_scores result (<0 rows>)
GOexpress
subset_scores
<0 rows>
8.1 years ago
sina.zboron
• 0
9
votes
8
replies
5.7k
views
heatmap of genes based on enriched GO categories
goexpress
gopro
9.0 years ago
Bogdan
▴ 670
5
votes
4
replies
2.2k
views
Contrasts in GOexpress analysis?
gene ontology
goexpress
updated 9.1 years ago by
kevin.rue
▴ 350 • written 9.1 years ago by
mforde84
▴ 20
0
votes
3
replies
5.0k
views
Gene ontology and pathway analysis in R - replicate ToppGene features; best strategy for getting annotations?
topgo
biomart
gene ontology
goexpress
pathway analysis
updated 9.8 years ago by
kevin.rue
▴ 350 • written 9.8 years ago by
Darya Vanichkina
▴ 130
2
votes
6
replies
3.4k
views
GOexpress: GO_analyse function throws Error: Space required after the Public Identifier
goexpress
updated 10.0 years ago by
kevin.rue
▴ 350 • written 10.0 years ago by
martin.hoelzer
▴ 20
3
votes
2
replies
1.9k
views
Is it common to get all 0 values when running the randomForest step in GOexpress?
goexpress
updated 10.4 years ago by
kevin.rue
▴ 350 • written 10.4 years ago by
willj
▴ 30
3
votes
6
replies
2.4k
views
GOexpress error at pValue_GO step
software error
goexpress
updated 10.4 years ago by
kevin.rue
▴ 350 • written 10.4 years ago by
kcamnairb
▴ 10
6
votes
7
replies
4.9k
views
GOexpress: use DESeq2 data object as input
GOexpress
deseq2
expressionset
10.4 years ago
martin.hoelzer
▴ 20
14 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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