Bioconductor Hclust

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4.9k

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dendrogram hclust textanalysis R RStudio

4.8 years ago Abby ▴ 10

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2.2k

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deseq2 pca hclust

updated 6.3 years ago by Michael Love 43k • written 6.3 years ago by Arindam ▴ 80

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2.6k

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hclust hierarchical clustering clustering weight

updated 8.5 years ago by Aaron Lun ★ 29k • written 8.5 years ago by danielle.newby • 0

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3.7k

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pheatmap hclust R dendrogram

8.7 years ago vd4mmind • 0

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2.1k

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WGCNA hclust

8.8 years ago bag59 • 0

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2.1k

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heatmap.2 hclust reorderfun

updated 9.0 years ago by James W. MacDonald 68k • written 9.0 years ago by b.nota ▴ 370

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2.2k

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clustering hclust maSigPro

updated 10.0 years ago by efejiroe • 0 • written 10.5 years ago by dimitri.leonid.lindenwald ▴ 50

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2.9k

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hclust heatmap

10.9 years ago rmgreer • 0

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4.9k

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wgcna dendrogram network hclust

updated 11.3 years ago by Keith Hughitt ▴ 180 • written 11.3 years ago by Jon Bråte ▴ 270

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4.4k

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wgcna hclust plotdendroandcolors dendrogram

updated 11.4 years ago by James W. MacDonald 68k • written 11.4 years ago by Keith Hughitt ▴ 180

10 results • Page 1 of 1

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Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Votes

Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Are transformed values from rlog /vst log2 normalized counts?

A: DESeq2 normalization vs VST vs rlog

Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline

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Teacher to Michael Love 43k

Supporter to fl ▴ 20

Popular Question to James W. MacDonald 68k