Bioconductor Minfi

Showing : minfi • reset

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6.2k

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methylationEPICv2.0 minfi

updated 6 months ago by jay ▴ 10 • written 14 months ago by luca.s ▴ 50

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3.8k

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DMRcate minfi

updated 3 months ago by Tim Peters ▴ 180 • written 7.1 years ago by Jenny Drnevich ★ 2.0k

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3.1k

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minfi bumphunter

updated 11 months ago by Jennifer Dehner • 0 • written 6.2 years ago by src3 • 0

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2.0k

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minfi

updated 3 months ago by nguyen • 0 • written 8 months ago by Deepa • 0

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1.5k

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ChAMP DMRcate minfi

updated 6 weeks ago by Tim Peters ▴ 180 • written 5 months ago by rae.alshammari ▴ 10

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967

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minfi limma

7 months ago dorota.komar • 0

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688

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minfi

7 months ago matthew.sinton • 0

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604

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minfi bumphunter

updated 7 months ago by Basti ▴ 780 • written 7 months ago by dorota.komar • 0

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590

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minfi DMRcate

3 months ago mycetes • 0

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585

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ageData missMethyl differentialvariability minfi

updated 7 weeks ago by CHEN • 0 • written 12 months ago by Saanchi • 0

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490

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minfi MethylationArray

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by sharangiiv • 0

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478

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SBE CpG minfi CpGinterrogation

5 months ago kyj2226 • 0

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408

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minfiDataEPIC minfi

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by phelankj • 0

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348

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minfiDataEPIC minfi

updated 5 months ago by Basti ▴ 780 • written 5 months ago by Ana • 0

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272

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Methylation minfi preprocessQuantile MethylationArrayData preprocessFunnorm

5 months ago kyj2226 • 0

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262

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min minfi

updated 18 days ago by James W. MacDonald 65k • written 7 weeks ago by clacarion • 0

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229

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minfiData minfi

updated 23 days ago by Basti ▴ 780 • written 25 days ago by clacarion • 0

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217

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minfi minfiDataEPIC

10 weeks ago Felix • 0

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192

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methylclockData minfi methylclock minfidata

updated 11 weeks ago by James W. MacDonald 65k • written 11 weeks ago by sharangiiv • 0

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161

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minfi minfiDataEPIC

updated 10 days ago by James W. MacDonald 65k • written 10 days ago by e1271094 • 0

20 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180