Bioconductor OpenCyto gating

Showing : openCyto gating • reset

votes

replies

1.1k

views

gating opencyto gating

7.4 years ago justinyi10 ▴ 10

vote

replies

796

views

opencyto gating

7.4 years ago justinyi10 ▴ 10

votes

941

views

opencyto gating

7.4 years ago justinyi10 ▴ 10

votes

replies

807

views

opencyto gating gating bioconductor

7.4 years ago justinyi10 ▴ 10

votes

replies

816

views

opencyto gating

7.4 years ago justinyi10 ▴ 10

votes

replies

766

views

opencyto gating

7.4 years ago justinyi10 ▴ 10

votes

885

views

opencyto gating bioconductor

7.4 years ago justinyi10 ▴ 10

votes

replies

1.1k

views

data.table opencyto gating csv files R

7.5 years ago Rivka • 0

votes

2.2k

views

flowcore opencyto gating flowset

updated 7.8 years ago by Jiang, Mike ★ 1.3k • written 7.8 years ago by jordan.xanthopoulos • 0

votes

1.2k

views

opencyto bioconductor opencyto gating

updated 7.9 years ago by Jiang, Mike ★ 1.3k • written 7.9 years ago by Rivka • 0

votes

2.5k

views

opencyto gating opencyto flowcore flowworkspace

updated 8.6 years ago by Jiang, Mike ★ 1.3k • written 8.6 years ago by anara92 • 0

vote

1.3k

views

opencyto gating flowcore flow cytometry

updated 8.6 years ago by Jiang, Mike ★ 1.3k • written 8.6 years ago by Ulrik Stervbo ▴ 30

votes

replies

2.6k

views

opencyto gating flowworkspace

updated 8.6 years ago by Jiang, Mike ★ 1.3k • written 8.6 years ago by Ulrik Stervbo ▴ 30

vote

replies

1.6k

views

opencyto gating

8.6 years ago Ulrik Stervbo ▴ 30

votes

replies

3.1k

views

flowclust opencyto opencyto gating

updated 9.0 years ago by Greg Finak ▴ 240 • written 9.1 years ago by Viktor Thiel • 0

votes

replies

1.8k

views

opencyto gating

updated 9.1 years ago by Jiang, Mike ★ 1.3k • written 9.1 years ago by veronikag • 0

votes

replies

3.4k

views

opencyto opencyto gating FlowJo

updated 9.9 years ago by Greg Finak ▴ 150 • written 9.9 years ago by juancamilos ▴ 10

votes

replies

1.8k

views

openCyto gating

10.2 years ago thomas.mohr ▴ 20

18 results • Page 1 of 1

Recent ...

Replies

Comment: What type of counts data to import for performing Isoform analysis in edgeR by ATpoint ★ 4.5k

Probably nf-core did not run with bootstrap/gibbs replicates. Check the code. See salmon docs on how to turn that on.

Comment: What type of counts data to import for performing Isoform analysis in edgeR by mohammedtoufiq91 ▴ 10

@atpoint Thank you. I did wanted to try using the `quant.sf` files from the `salmon` run by referring edgeR user guide example `4.6 Differe…

Comment: athPkgBuilder data source :missing probesets by bobihanigujjar • 0

In this article, we'll explore the demand for unbranded BJJ Gis and the benefits of choosing unbranded Gis for customization. [does anyone …

Comment: Crossover design with limma by SamGG ▴ 360

IMHO, here are the missing annotations treatmentdrug_orderDrugPlac - treatmentplacebo_orderDrugPlac, # effect of drug for the Drug…

Answer: What type of counts data to import for performing Isoform analysis in edgeR by ATpoint ★ 4.5k

You don't need any of these files. You need the `catchSalmon` function which reads `quant.sf` and the inferential (Bootstrap/Gibbs) replica…

Votes

Comment: ANOVA like approach of edgeR

Comment: Crossover design with limma

Answer: DESeq2 normalization vs VST vs rlog

Comment: makeContrastsDream for Interaction

Answer: Limma- Print-tip loess normalisation-printer layout information does not match M

Awards • All

Popular Question to Marek Gierlinski ▴ 30

Scholar to Gordon Smyth 52k

Popular Question to mohammedtoufiq91 ▴ 10

Popular Question to Hans-Ulrich Klein ▴ 330