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openCyto gating
•
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0
votes
0
replies
1.1k
views
How to construct a polygon gate?
gating
opencyto gating
7.5 years ago
justinyi10
▴ 10
1
vote
0
replies
809
views
Don't understand what's causing this error
opencyto gating
7.5 years ago
justinyi10
▴ 10
0
votes
1
reply
968
views
Error when gating from gating template
opencyto gating
7.5 years ago
justinyi10
▴ 10
0
votes
0
replies
827
views
Error while gating from gating template
opencyto gating
gating
bioconductor
7.5 years ago
justinyi10
▴ 10
0
votes
0
replies
837
views
Additional populations added when trying to gate from gating template
opencyto gating
7.5 years ago
justinyi10
▴ 10
0
votes
0
replies
783
views
Gating template for monocytes?
opencyto gating
7.5 years ago
justinyi10
▴ 10
0
votes
1
reply
903
views
Trying to read in a gating template causes error
opencyto gating
bioconductor
7.5 years ago
justinyi10
▴ 10
0
votes
0
replies
1.1k
views
Use "gating.template" on data.table
data.table
opencyto gating
csv files
R
7.6 years ago
Rivka
• 0
0
votes
1
reply
2.2k
views
Exporting FCS files from GatingSet
flowcore
opencyto gating
flowset
updated 7.9 years ago by
Jiang, Mike
★ 1.3k • written 7.9 years ago by
jordan.xanthopoulos
• 0
2
votes
1
reply
1.2k
views
openCyto working Example: expects {flowWorkspace} but example
opencyto
bioconductor
opencyto gating
updated 8.0 years ago by
Jiang, Mike
★ 1.3k • written 8.0 years ago by
Rivka
• 0
0
votes
1
reply
2.5k
views
reading an ".xml" file as FlowJo Workspace file
opencyto gating
opencyto
flowcore
flowworkspace
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.7 years ago by
anara92
• 0
1
vote
1
reply
1.3k
views
OpenCyto -- time gate and border events
opencyto gating
flowcore
flow cytometry
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.7 years ago by
Ulrik Stervbo
▴ 30
0
votes
2
replies
2.7k
views
OpenCyto -- proper gating of CD45
opencyto gating
flowworkspace
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.7 years ago by
Ulrik Stervbo
▴ 30
1
vote
0
replies
1.6k
views
OpenCyto - getting the gates correct
opencyto gating
8.7 years ago
Ulrik Stervbo
▴ 30
4
votes
8
replies
3.2k
views
openCyto: usage and visualization of quadGate.tmix / collapsing data for flowClust
flowclust
opencyto
opencyto gating
updated 9.1 years ago by
Greg Finak
▴ 240 • written 9.2 years ago by
Viktor Thiel
• 0
0
votes
2
replies
1.9k
views
openCyto - how to get the MFI (mean fluorescence intensities)
opencyto gating
updated 9.2 years ago by
Jiang, Mike
★ 1.3k • written 9.2 years ago by
veronikag
• 0
5
votes
4
replies
3.5k
views
openCyto: Using combination gates (boolean gates)
opencyto
opencyto gating
FlowJo
updated 10.0 years ago by
Greg Finak
▴ 150 • written 10.0 years ago by
juancamilos
▴ 10
0
votes
5
replies
1.8k
views
openCyto automatic gating:
openCyto gating
10.3 years ago
thomas.mohr
▴ 20
18 results • Page
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Comment: Problems with oarfish + tximport + swish
by
brown.annaleigh
• 0
Awesome possum! Update works!! Thank you so much for the help and guidance!
Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal
by
iqratechnology4
• 0
Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/
Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
by
James W. MacDonald
67k
> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…
Comment: Problems with oarfish + tximport + swish
by
Michael Love
43k
Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …
Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
by
Jonathan
▴ 10
Thank you; I was indeed using `DGEList` on the count matrix, but with the multiple edits of the post I forgot to include this step. BTW, …
Votes
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Limma Interaction Effect with Covariates
Comment: DESeq2 for single cell pseudobulk processing
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