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openCyto gating
•
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0
votes
0
replies
947
views
How to construct a polygon gate?
gating
opencyto gating
6.8 years ago
justinyi10
▴ 10
1
vote
0
replies
688
views
Don't understand what's causing this error
opencyto gating
6.8 years ago
justinyi10
▴ 10
0
votes
1
reply
807
views
Error when gating from gating template
opencyto gating
6.8 years ago
justinyi10
▴ 10
0
votes
0
replies
686
views
Error while gating from gating template
opencyto gating
gating
bioconductor
6.8 years ago
justinyi10
▴ 10
0
votes
0
replies
693
views
Additional populations added when trying to gate from gating template
opencyto gating
6.8 years ago
justinyi10
▴ 10
0
votes
0
replies
609
views
Gating template for monocytes?
opencyto gating
6.8 years ago
justinyi10
▴ 10
0
votes
1
reply
760
views
Trying to read in a gating template causes error
opencyto gating
bioconductor
6.8 years ago
justinyi10
▴ 10
0
votes
0
replies
938
views
Use "gating.template" on data.table
data.table
opencyto gating
csv files
R
6.9 years ago
Rivka
• 0
0
votes
1
reply
1.9k
views
Exporting FCS files from GatingSet
flowcore
opencyto gating
flowset
updated 7.2 years ago by
Jiang, Mike
★ 1.3k • written 7.2 years ago by
jordan.xanthopoulos
• 0
2
votes
1
reply
1.0k
views
openCyto working Example: expects {flowWorkspace} but example
opencyto
bioconductor
opencyto gating
updated 7.3 years ago by
Jiang, Mike
★ 1.3k • written 7.3 years ago by
Rivka
• 0
0
votes
1
reply
2.2k
views
reading an ".xml" file as FlowJo Workspace file
opencyto gating
opencyto
flowcore
flowworkspace
updated 8.0 years ago by
Jiang, Mike
★ 1.3k • written 8.0 years ago by
anara92
• 0
1
vote
1
reply
1.1k
views
OpenCyto -- time gate and border events
opencyto gating
flowcore
flow cytometry
updated 8.0 years ago by
Jiang, Mike
★ 1.3k • written 8.0 years ago by
Ulrik Stervbo
▴ 30
0
votes
2
replies
2.4k
views
OpenCyto -- proper gating of CD45
opencyto gating
flowworkspace
updated 8.0 years ago by
Jiang, Mike
★ 1.3k • written 8.0 years ago by
Ulrik Stervbo
▴ 30
1
vote
0
replies
1.4k
views
OpenCyto - getting the gates correct
opencyto gating
8.0 years ago
Ulrik Stervbo
▴ 30
4
votes
8
replies
2.8k
views
openCyto: usage and visualization of quadGate.tmix / collapsing data for flowClust
flowclust
opencyto
opencyto gating
updated 8.4 years ago by
Greg Finak
▴ 240 • written 8.5 years ago by
Viktor Thiel
• 0
0
votes
2
replies
1.6k
views
openCyto - how to get the MFI (mean fluorescence intensities)
opencyto gating
updated 8.5 years ago by
Jiang, Mike
★ 1.3k • written 8.5 years ago by
veronikag
• 0
5
votes
4
replies
3.1k
views
openCyto: Using combination gates (boolean gates)
opencyto
opencyto gating
FlowJo
updated 9.3 years ago by
Greg Finak
▴ 150 • written 9.3 years ago by
juancamilos
▴ 10
0
votes
5
replies
1.5k
views
openCyto automatic gating:
openCyto gating
9.6 years ago
thomas.mohr
▴ 20
18 results • Page
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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