Showing : process • reset
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flowQ on WinXP: Error in matrix for dimnames
PROcess flowQ PROcess flowQ
updated 15.5 years ago by ▴ 340 • written 15.5 years ago by ▴ 20
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2
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1.7k
views
Error compiling GeneR package
PROcess GeneR PROcess GeneR
15.5 years ago Andrés Rogers ▴ 20
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897
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Agi4x44 PreProcessing for GSE11682 Data Set
PROcess PROcess
15.5 years ago Sathe, Tejas ▴ 20
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778
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get BP GOterm from geneID
GO PROcess GO PROcess
15.6 years ago Yuan Jian ▴ 250
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6
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1.9k
views
xps and unifilter; Error: UnitID not found; error in function ‘ExportData’
PROcess PROcess
updated 15.6 years ago by ★ 3.9k • written 15.6 years ago by ▴ 170
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1
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955
views
expression profile
PROcess PROcess
updated 15.6 years ago by 68k • written 15.6 years ago by ▴ 270
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1
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1.8k
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TLDA data
Clustering Cancer PROcess cycle HTqPCR Clustering Cancer PROcess cycle HTqPCR
updated 15.6 years ago by ★ 2.0k • written 15.6 years ago by ▴ 40
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xps - creating ROOT scheme fi les
Annotation Preprocessing cdf PROcess oligo xps Annotation Preprocessing cdf PROcess xps
15.6 years ago Benilton Carvalho ★ 4.3k
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1
reply
813
views
Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs
PROcess PROcess
updated 15.7 years ago by ★ 2.0k • written 15.7 years ago by ▴ 870
0
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1
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1.1k
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R: R: Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs
PROcess PROcess
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 870
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1
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978
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R: Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs
PROcess PROcess
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 870
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2
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1.3k
views
R: Validated miRNAs revisited
PROcess PROcess
updated 15.7 years ago by ★ 3.4k • written 15.7 years ago by ▴ 870
0
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1
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1.4k
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segfault with rmaMicroRna in AgiMicroRna package
PROcess AgiMicroRna PROcess AgiMicroRna
updated 15.7 years ago by ★ 7.4k • written 15.7 years ago by ▴ 360
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0
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2.2k
views
How to normalize Illumina bead-level data ?
SNP Normalization GO PROcess beadarraySNP SNP Normalization GO PROcess beadarraySNP
15.7 years ago Jonas Mandel ▴ 10
0
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3
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1.1k
views
custom Affymetrix
Clustering PROcess Clustering PROcess
updated 15.7 years ago by ★ 13k • written 15.7 years ago by ▴ 20
0
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2
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2.9k
views
NA/NaN/Inf in foreign function call in mas5calls function
probe affy PROcess probe affy PROcess
updated 15.7 years ago by 68k • written 15.8 years ago by ▴ 10
0
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2
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4.0k
views
using Blat in R
Alignment PROcess Alignment PROcess
updated 15.8 years ago by ★ 1.9k • written 15.8 years ago by ▴ 250
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1
reply
1.3k
views
readMicroRnaAFE function in AgiMicroR package
miRNA Microarray Annotation PROcess miRNA Microarray Annotation PROcess
updated 15.8 years ago by ▴ 360 • written 15.8 years ago by ▴ 360
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1
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1.4k
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filtering in GSEABase package
GO hgu95av2 mouse4302 PROcess Category GO hgu95av2 mouse4302 PROcess Category
updated 15.8 years ago by ▴ 610 • written 15.8 years ago by ▴ 190
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897
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Favor: ChIPpeakAnno
PROcess PROcess
15.8 years ago Julie Zhu ★ 4.3k
0
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4
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1.9k
views
Reg: T-statistic using limma
PROcess PROcess
15.8 years ago Rohit Farmer ▴ 170
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0
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1.5k
views
mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
Annotation GO Mus musculus PROcess topGO Annotation GO Mus musculus PROcess topGO
15.9 years ago Dick Beyer ★ 1.4k
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2
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1.7k
views
mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
GO Mus musculus PROcess topGO GO Mus musculus PROcess topGO
updated 15.9 years ago by 21k • written 15.9 years ago by ★ 1.4k
0
votes
0
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1.2k
views
Comparing gene set enrichment lists / GO terms
Microarray GO PROcess Microarray GO PROcess
15.9 years ago michael watson IAH-C ★ 3.4k
0
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0
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986
views
Updated new package submission process
Cancer PROcess Cancer PROcess
15.9 years ago Martin Morgan 25k
0
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0
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883
views
Question regarding Installation of annotation package which was built using SQLforge (Suyog Pol)
Annotation GO Cancer ChipName probe genefilter PROcess Annotation GO Cancer ChipName
16.0 years ago Suyog Pol ▴ 40
0
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1
reply
1.5k
views
Question regarding Installation of annotation package which was built using SQLforge
Annotation GO ChipName probe PROcess Annotation GO ChipName probe PROcess
updated 16.0 years ago by ★ 7.4k • written 16.0 years ago by ▴ 40
0
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1
reply
1.4k
views
generate a CDF file from Affymetrix ST array 1.1 library
cdf probe PROcess cdf probe PROcess
updated 16.0 years ago by ★ 4.3k • written 16.0 years ago by ▴ 160
0
votes
3
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1.7k
views
GOHyperGResult in a data.frame, possible NAMESPACE problem?
GO Biobase annotate PROcess GOstats Category AnnotationDbi GO Biobase annotate PROcess
updated 16.0 years ago by ★ 7.4k • written 16.0 years ago by ★ 3.4k
0
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6
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2.1k
views
Regarding KEGGgraph
Pathways Network PROcess Pathways Network PROcess
updated 16.0 years ago by ★ 13k • written 16.0 years ago by ▴ 270
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0
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617
views
troubles with writeTpmap {affxparser} - backconverted BPMAP fails to process
PROcess PROcess
16.0 years ago Ann Loraine ▴ 110
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0
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971
views
need output to contain probe x, y coordinates on array - AffyTiling
Microarray probe PROcess genomes Microarray probe PROcess genomes
16.0 years ago Charles Danko ▴ 40
0
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0
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1.1k
views
Genominator upgraded in the release branch
PROcess Genominator PROcess Genominator
16.0 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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1000
views
need output to contain probe x, y coordinates on array - AffyTiling
probe PROcess genomes probe PROcess genomes
16.0 years ago Ann Loraine ▴ 110
0
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0
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968
views
troubles with writeTpmap {affxparser} - backconverted BPMAP fails to process
PROcess convert PROcess convert
16.0 years ago Ann Loraine ▴ 110
0
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1
reply
2.4k
views
Help on matrix design in Limma - paired samples and two conditions
Cancer limma PROcess Cancer limma PROcess
updated 16.1 years ago by ▴ 350 • written 16.1 years ago by ▴ 10
1
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9
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3.8k
views
BLAST search sequence for species ID from R?
Biostrings PROcess Biostrings PROcess
updated 16.1 years ago by ▴ 550 • written 16.1 years ago by ▴ 40
0
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13
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2.6k
views
problem with data processing in R
PROcess GLAD PROcess GLAD
updated 16.1 years ago by ★ 1.7k • written 16.1 years ago by ▴ 170
0
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0
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1.1k
views
choosing explanatory variables for linear model in limma
GO limma PROcess GO limma PROcess
16.1 years ago Yannick Wurm ▴ 220
0
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2
replies
1.3k
views
Question on PROcess package
PROcess PROcess
updated 16.1 years ago by ▴ 20 • written 16.1 years ago by ▴ 350
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0
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1.0k
views
Question on PROcess package
PROcess PROcess
16.1 years ago Farida Mostajabi ▴ 20
0
votes
0
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801
views
End of the line of GOstats: making sense of the hypergeometric test results now
GO PROcess GOstats GO PROcess GOstats
16.1 years ago James W. MacDonald 68k
0
votes
1
reply
1.5k
views
Sample size estimation for independent validation set
Microarray Classification PROcess Microarray Classification PROcess
updated 16.1 years ago by ▴ 110 • written 16.1 years ago by ▴ 10
0
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3
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2.0k
views
R: Can an R script be run through a cron job ?
miRNA PROcess biomaRt miRNA PROcess biomaRt
updated 16.2 years ago by ★ 1.3k • written 16.2 years ago by ▴ 870
0
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1
reply
1.4k
views
Problem with rma function in xps package with Affymetrix Human Gene 1.0 ST Array
Preprocessing PROcess xps Preprocessing PROcess xps
updated 16.2 years ago by ★ 3.9k • written 16.2 years ago by ▴ 170
0
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0
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1.2k
views
Student project at European Bioinformatics Institute
Microarray Annotation Visualization PROcess Microarray Annotation Visualization PROcess
16.2 years ago Gabriella Rustici ▴ 60
0
votes
0
replies
1.6k
views
Post-doc bio-informatics in next generation sequencing (36 h) (VUMC - The Netherlands)
Sequencing Genetics Classification Cancer PROcess Sequencing Genetics Classification
16.2 years ago Reek, J. ▴ 10
0
votes
0
replies
703
views
about Rgraphviz
Rgraphviz PROcess Rgraphviz PROcess
16.2 years ago Jenny Drnevich ★ 2.0k
0
votes
0
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1.4k
views
Job advertisement
Transcription Sequencing Microarray Normalization Pathways PROcess Transcription Sequencing
16.3 years ago Alexandre Kuhn ▴ 60
0
votes
0
replies
595
views
What should be in databases.txt for exonmap?
PROcess PROcess
16.3 years ago Peng Yu ▴ 950
651 results • Page 7 of 14
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Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0
Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…
Comment: Ensembl plants at annotationHub? by jwp48 • 0
Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k
Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
Comment: Guitar R package requires update due to dependency GenomicFeatures by ferran.llobet.cabau ▴ 10
Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…
Comment: Ensembl plants at annotationHub? by Guido Hooiveld ★ 4.1k
Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…
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Answer: Where do the filename come from in the LOLA datasets?
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