Bioconductor Refseq

Showing : refseq • reset

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3.4k

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ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb

updated 8.3 years ago by Hervé Pagès 16k • written 8.3 years ago by gokcen.eraslan ▴ 10

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3.7k

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refseq annotationhub

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by dalloliogm ▴ 50

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2.6k

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promoter granges refseq ucsc organismdb

updated 8.4 years ago by Robert Castelo ★ 3.3k • written 8.4 years ago by efoss ▴ 10

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2.6k

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genomicfeatures maketxdbfromucsc refseq

updated 7.8 years ago by Hervé Pagès 16k • written 7.8 years ago by Sebastien Vigneau ▴ 10

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2.8k

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edgeR ENEMBL RefSeq

updated 5.1 years ago by Gordon Smyth 50k • written 5.1 years ago by mzillur • 0

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1.9k

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tximport Gene IDs txdb RefSeq Salmon

updated 4.2 years ago by Michael Love 41k • written 4.2 years ago by holmkn • 0

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1.6k

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customprodb dbsnp refseq varianttools

updated 8.8 years ago by xiaojing.wang ▴ 50 • written 8.8 years ago by kristenbeck527 • 0

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506

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RefSeq Chromosome Mutalyzer

4.0 years ago heiko_kin ▴ 60

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853

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refseq Bioconductor conversion

3.4 years ago heiko_kin ▴ 60

9 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0