Biostar Rna seq

Showing : rna seq • reset

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757

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deseq2 mahattan plot RNA Seq

updated 12 months ago by bernatgel ▴ 130 • written 2.0 years ago by adeler001 • 0

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687

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batch effect limma rna seq DE

updated 18 months ago by Steve Lianoglou 13k • written 18 months ago by svlachavas ▴ 780

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167

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RNA seq cpm

updated 18 months ago by Kevin Blighe 3.4k • written 18 months ago by isabel.pieterse • 0

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254

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sgseq alternative splicing rna seq

updated 23 months ago by Leonard Goldstein ▴ 110 • written 23 months ago by 116100016 • 0

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249

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edger RNA Seq

updated 23 months ago by James W. MacDonald 58k • written 23 months ago by abf ▴ 30

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152

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rna seq

23 months ago adeler001 • 0

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235

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rna seq SGSeq Alternative splicing

updated 2.0 years ago by Leonard Goldstein ▴ 110 • written 2.0 years ago by 116100016 • 0

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182

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deseq2 likelihood ratio rna seq wald test

updated 2.1 years ago by Michael Love 34k • written 2.1 years ago by adeler001 • 0

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337

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volcano plot rna seq

updated 2.2 years ago by Michael Love 34k • written 2.2 years ago by adeler001 • 0

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463

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limma voom RNA Seq Time-course experiments

updated 2.3 years ago by Aaron Lun ★ 27k • written 2.3 years ago by mahes.muniandy • 0

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362

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RNA seq wgcna

updated 2.4 years ago by Peter Langfelder ★ 2.6k • written 2.4 years ago by agustin.gonvi ▴ 10

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562

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rna seq trimmomatic trimming adapter trimming paired analysis

2.5 years ago Mozart ▴ 20

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861

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heatmap.2 hierarchical clustering microarray RNA seq DEG

3.7 years ago lawarde.ankita1 ▴ 20

13 results • Page 1 of 1

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Comment: BiocCheck incorrectly reports I'm not registered on this site by yoann.pageaud • 0

Maybe you registered with another E-mail adress than the one you mentionned in your package DESCRIPTION ?

Comment: getPromoters by guoyou88 • 0

Thanks for your reply. It's very likely the getPromoter function works as you said. When I perform intersection between ChIPseq peaks and p…

Comment: Installation of RnBeads package fails on Ubuntu 18.04.5 LTS by mscherer ▴ 50

The whole process would look something like this: #Create the environment conda create rnbeads bioconductor-rnbeads conda acti…

Comment: Installation of RnBeads package fails on Ubuntu 18.04.5 LTS by j6163mls • 0

Hi mscherer, Let me, please, I ask you : when you have installed bioconductor-rnbeads with conda, could you write the next steps (code) to…

Comment: getPromoters by Guillaume Devailly ▴ 30

My intuition is that it returns the "TSS" of the genes table (instead of looking at the transcripts table), that is to say the `start` of +…

Votes

Answer: Error arrayQualityMetrics

Comment: Running the DESeq2 "DESeqDataSetFromMatrix" function returns a dimname error

Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)

Answer: scater::plotHeatmap with swap_rownames gives error

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