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seqinr
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Seqinr for FASTQ files?
fastq
fast
seqinr
updated 2.8 years ago by
ATpoint
★ 4.6k • written 2.8 years ago by
hank00000
• 0
0
votes
0
replies
1.3k
views
Match peptide within protein sequence fasta and extract position information based on protein sequence
R
seqinr
biostrings
6.4 years ago
rabalski
• 0
0
votes
1
reply
908
views
SeqinR socketConnection error help?
seqinr
updated 6.5 years ago by
Martin Morgan
25k • written 6.5 years ago by
daviqd.halvorsen
• 0
0
votes
0
replies
1.1k
views
Sequencing database tool in R: tracking Sanger and NGS of large-scale directed evolution projects
rmysql
fastq
seqinr
ngs
sangerseqr
6.8 years ago
JoeMG
• 0
2
votes
1
reply
5.1k
views
Reading fasta file with multiple sequences
multiple sequences
bioconductor
rstudio
seqinr
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
Riot
• 0
1
vote
1
reply
1.4k
views
Given a multifasta file and for each sequence, shuffle middle part of the sequence leaving the flanks intact and the opposite
shuffle
regioner
seqinr
updated 8.2 years ago by
Martin Morgan
25k • written 8.2 years ago by
Dimitris Polychronopoulos
▴ 80
1
vote
7
replies
3.6k
views
seqinr package - choosebank() function not connecting
seqinr
choose bank
error message
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
jayanthisahithi
▴ 10
4
votes
3
replies
4.2k
views
a package for read.fasta
seqinr
fasta
updated 9.4 years ago by
Hervé Pagès
16k • written 9.5 years ago by
Angel
▴ 40
8 results • Page
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Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes
by
James W. MacDonald
67k
This support site is meant to provide support for Bioconductor packages, but `Meffil` is not part of Bioconductor. You could presumably con…
Comment: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
> It looks like the ssgseaParam function might not be passing the > correct parameters to GSVA::gsva() Apparently because of the extra com…
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
by
franknappi14
• 0
I tried it and it's working properly.
Answer: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis
by
ATpoint
★ 4.6k
The vignette covers batch effects as per the authors best practice, please read it and consider following it.
Comment: DESeq2 analysis with transcript counts
by
kahunroleh
• 0
Thanks for sharing the solution. I also face this problem. [nulls][1] [1]: https://nulls-brawl-apk.fr/
Votes
Answer: Reducing and aggregating GRanges with gaps using plyranges
Answer: Find exact GRanges match keeping metadata columns
Answer: Find exact GRanges match keeping metadata columns
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
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