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sequence
•
reset
0
votes
1
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977
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Scoring DNA motifs by conservation
conservation
sequence
genomicalignments
6.5 years ago
martin.busch
• 0
4
votes
3
replies
1.9k
views
Extracting sequences from BSgenomeViews object
sequence
bsgenome
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
nicola.romano
▴ 10
0
votes
2
replies
2.6k
views
Biostrings: retrieve 3'UTR sequence with Transcript
R
Biostrings
sequence
updated 7.9 years ago by
Mike Smith
★ 6.6k • written 7.9 years ago by
aspenaure
• 0
2
votes
4
replies
1.6k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 8.0 years ago by
Michael Lawrence
★ 11k • written 8.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.2k
views
Map siRNA-Sequence to Gene
sequence
annotationhub
biostrings
updated 9.5 years ago by
Hervé Pagès
16k • written 9.5 years ago by
antje.janosch
• 0
0
votes
1
reply
1.6k
views
ABI HRM data analysis
ABI
sequence
DNA
melting
curve
updated 9.7 years ago by
Hervé Pagès
16k • written 9.7 years ago by
Prasanth
▴ 20
3
votes
3
replies
1.9k
views
Reading large DNA alignments and keeping polymorphic sites
sequence
alignment
biostrings
updated 10.1 years ago by
Hervé Pagès
16k • written 10.2 years ago by
ben.ward
▴ 30
0
votes
2
replies
2.0k
views
How do I extract data from a .ab1 file ?
ab1
sequence
sangerseqR
updated 10.2 years ago by
aaron.l.statham
▴ 10 • written 10.2 years ago by
anuragm
• 0
8 results • Page
1 of 1
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Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes
by
James W. MacDonald
67k
This support site is meant to provide support for Bioconductor packages, but `Meffil` is not part of Bioconductor. You could presumably con…
Comment: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
> It looks like the ssgseaParam function might not be passing the > correct parameters to GSVA::gsva() Apparently because of the extra com…
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
by
franknappi14
• 0
I tried it and it's working properly.
Answer: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis
by
ATpoint
★ 4.6k
The vignette covers batch effects as per the authors best practice, please read it and consider following it.
Comment: DESeq2 analysis with transcript counts
by
kahunroleh
• 0
Thanks for sharing the solution. I also face this problem. [nulls][1] [1]: https://nulls-brawl-apk.fr/
Votes
Comment: Unused arguments error without used arguments in GSVA?
Answer: Reducing and aggregating GRanges with gaps using plyranges
Answer: Find exact GRanges match keeping metadata columns
Answer: Find exact GRanges match keeping metadata columns
Answer: Unused arguments error without used arguments in GSVA?
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