Bioconductor Simplesinglecell

Showing : simplesinglecell • reset

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3.0k

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DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling

updated 5.2 years ago by Aaron Lun ★ 29k • written 6.3 years ago by C T ▴ 140

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1.9k

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simpleSingleCell

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by Angelos Armen • 0

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1.1k

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simpleSingleCell

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by Angelos Armen • 0

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5.6k

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DropletUtils EmptyDrops simpleSingleCell

updated 3.4 years ago by Stefano Mangiola ▴ 40 • written 6.4 years ago by shbrief ▴ 20

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2.4k

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scran simpleSingleCell

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by Angelos Armen • 0

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3.7k

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limma edgeR simplesingleCell scran scater

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by Bogdan ▴ 670

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2.4k

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SingleCellExperiment scran limma simpleSingleCell

updated 6.6 years ago by Aaron Lun ★ 29k • written 6.6 years ago by Matt Mulé • 0

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2.2k

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DropletUtils SingleCellExperiement DelayedArray simpleSingleCell

updated 6.6 years ago by Aaron Lun ★ 29k • written 6.6 years ago by Steve Pederson ▴ 170

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3.7k

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singlecellexperiment dropletutils simplesinglecell

updated 7.2 years ago by Aaron Lun ★ 29k • written 7.2 years ago by Peter Hickey ▴ 760

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1.3k

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workflows simplesinglecell

updated 7.3 years ago by Aaron Lun ★ 29k • written 7.3 years ago by es.azadian • 0

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1.4k

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simplesinglecell

updated 7.8 years ago by Aaron Lun ★ 29k • written 7.8 years ago by Xingyu • 0

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2.4k

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scater singlecellexperiment simplesinglecell

updated 7.9 years ago by Aaron Lun ★ 29k • written 7.9 years ago by Xingyu • 0

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4.2k

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scater simpleSingleCell workflows

updated 8.5 years ago by Aaron Lun ★ 29k • written 8.5 years ago by sandmann.t ▴ 70

13 results • Page 1 of 1

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Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0

Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…

Comment: DESeq2 on non-RNASeq counts data by TikTsokaasocissalpc • 0

In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…

Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0

Sounds good. @[time][1] [1]: https://timeduration.github.io

Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0

For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…

Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k

Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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