Bioconductor Snps

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2.6k

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snps VCF

updated 2.0 years ago by Arafat • 0 • written 7.2 years ago by rkdonthu ▴ 10

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608

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hierClust R SNPs clustering

updated 2.1 years ago by James W. MacDonald 65k • written 2.1 years ago by sekhwal • 0

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840

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SNPs

5.1 years ago pltbiotech_tkarthi • 0

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1.2k

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snps vcf venn diagram ggplot2

5.4 years ago mictadlo ▴ 10

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1.2k

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bioconductor molecular biology snps

updated 5.4 years ago by James W. MacDonald 65k • written 5.4 years ago by jebreen20 • 0

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2.5k

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motifbreakR vcf snps motif analysis

updated 5.9 years ago by Valerie Obenchain ★ 6.8k • written 5.9 years ago by svlachavas ▴ 830

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1.4k

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variantannotation SNPs txdb.hsapiens.ucsc.hg19.knowngene ucsc

updated 6.9 years ago by Valerie Obenchain ★ 6.8k • written 6.9 years ago by Lna • 0

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1.4k

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hsapiens snps indels

updated 8.4 years ago by Hervé Pagès 16k • written 8.5 years ago by kredens • 0

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1.5k

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Biostrings SNPs alignment

updated 8.8 years ago by Hervé Pagès 16k • written 8.8 years ago by ben.ward ▴ 30

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1.8k

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gviz ideogram snps

updated 9.3 years ago by florian.hahne@novartis.com ★ 1.6k • written 9.3 years ago by vnyirongo • 0

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2.1k

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overlap snps granges iranges

updated 9.6 years ago by Michael Lawrence ★ 11k • written 9.6 years ago by anastasiya-terskih ▴ 10

11 results • Page 1 of 1

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Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

Comment: deseq2 results by swbarnes2 ★ 1.4k

It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…

Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Dylan.Sheerin • 0

Thank you very much, Gordon. I'll give voomLmFit a go!

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Gordon Smyth 50k

Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…

Votes

Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

Answer: Extremely small p-values using Limma for proteomic data

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