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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma
roast
statistics
source code
gene set testing
5.7 years ago
Andrea Carenzo
• 0
0
votes
0
replies
932
views
Error while extracting pseudo amino acid composition using protr
r
source code
error
5.9 years ago
shreyasarkar0
• 0
2
votes
4
replies
1.1k
views
package "isa2", function isa.iterate()
source code
isa.iterate()
updated 6.9 years ago by
Haiying.Kong
▴ 110 • written 6.9 years ago by
zhang.jianhai
▴ 10
4
votes
4
replies
1.6k
views
Where can I use the VSN source code in C++?
vsn
r language
C++
source code
updated 7.2 years ago by
Lluís Revilla Sancho
▴ 730 • written 7.2 years ago by
core_wzw
• 0
0
votes
1
reply
1.1k
views
get LCMS masses with more significant figures
source code
xcms
m/z
groupval
xcmsSet
updated 7.5 years ago by
Johannes Rainer
★ 2.0k • written 7.5 years ago by
juniormbarga
• 0
0
votes
3
replies
2.2k
views
Locating older version of Bioconductor packages
reproducibility
archive
source code
updated 8.6 years ago by
Dan Tenenbaum
★ 8.2k • written 8.6 years ago by
brucbruc
• 0
0
votes
2
replies
1.4k
views
Bioconductor source code - Errno::ECONNREFUSED in Codes#show
medips
bioconductor
error
source code
9.4 years ago
malbert1
• 0
7 results • Page
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Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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Michael Love
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DevelopingHippo
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Robert Castelo
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