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Is it appropriate to apply linear mixed models to Voom transformed data?
stats
r
RNASeqData
limma
voom
2.2 years ago
pl23
• 0
3
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4
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2.9k
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R session aborted: prcomp
Biobase
stats
updated 4.8 years ago by
Kevin Blighe
★ 4.0k • written 4.8 years ago by
Gero
• 0
0
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0
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1.8k
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Job:
Two Post-doctoral Positions at University of Campinas
post-doc
job
stats
computational biology
Job
9.4 years ago
Benilton Carvalho
★ 4.3k
0
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0
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1.7k
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Job:
Data Scientist / Bioinformatician / Statistician at University of California
R
python
stats
bioinformatics
perl
Job
9.5 years ago
clif.duhn
• 0
5
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6
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2.0k
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getting a matrix with diagonal =1
stats
updated 10.1 years ago by
Aaron Lun
★ 29k • written 10.1 years ago by
Angel
▴ 40
3
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3
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2.7k
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ribosome profiling analysis with different dispersions
deseq2
linear model
ribosome profiling
stats
updated 10.5 years ago by
Ryan C. Thompson
★ 7.9k • written 10.5 years ago by
Jake
▴ 90
2
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2
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2.8k
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Memory management in R
stats
updated 10.8 years ago by
Martin Morgan
25k • written 10.8 years ago by
mrk.carty
▴ 30
2
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5
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2.1k
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Download the stats of Bioconductor
bioconductor
stats
11.0 years ago
Lluís Revilla Sancho
▴ 760
8 results • Page
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Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list'
by
varying.mastodon.isyn
• 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency)
by
Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
by
ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Comment: limpa analysis advice
by
Gordon Smyth
53k
I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…
Answer: Confirm that OpenStats will not be archived (pryr dependency)
by
shepherl
4.3k
As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…
Votes
A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
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