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Is it appropriate to apply linear mixed models to Voom transformed data?
stats r RNASeqData limma voom
2.0 years ago pl23 • 0
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R session aborted: prcomp
Biobase stats
updated 4.7 years ago by ★ 4.0k • written 4.7 years ago by • 0
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Job: Two Post-doctoral Positions at University of Campinas
post-doc job stats computational biology Job
9.3 years ago • updated 9.2 years ago Benilton Carvalho ★ 4.3k
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Job: Data Scientist / Bioinformatician / Statistician at University of California
R python stats bioinformatics perl Job
9.3 years ago clif.duhn • 0
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getting a matrix with diagonal =1
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updated 9.9 years ago by ★ 29k • written 9.9 years ago by ▴ 40
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ribosome profiling analysis with different dispersions
deseq2 linear model ribosome profiling stats
updated 10.3 years ago by ★ 7.9k • written 10.3 years ago by ▴ 90
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Memory management in R
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updated 10.7 years ago by 25k • written 10.7 years ago by ▴ 30
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Download the stats of Bioconductor
bioconductor stats
10.9 years ago Lluís Revilla Sancho ▴ 760
8 results • Page 1 of 1
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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release by Jeroen ▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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