Biostar Stats

Showing : stats • reset

votes

replies

934

views

stats

updated 6.4 years ago by Aaron Lun ★ 27k • written 6.4 years ago by Angel ▴ 40

votes

replies

1.7k

views

deseq2 linear model ribosome profiling stats

updated 6.8 years ago by Ryan C. Thompson 7.8k • written 6.8 years ago by Jake ▴ 90

votes

replies

853

views

Biobase stats

updated 14 months ago by Kevin Blighe 3.5k • written 14 months ago by Gero • 0

votes

replies

1.8k

views

stats

updated 7.2 years ago by Martin Morgan 25k • written 7.2 years ago by mrk.carty ▴ 30

votes

replies

1.1k

views

bioconductor stats

7.4 years ago Lluís Revilla Sancho ▴ 660

votes

replies

948

views

R python stats bioinformatics perl Job

5.8 years ago clif.duhn • 0

votes

replies

901

views

post-doc job stats computational biology Job

5.8 years ago • updated 5.7 years ago Benilton Carvalho ★ 4.3k

7 results • Page 1 of 1

Recent ...

Replies

Comment: Italicise by Pau • 0

They're the same: example of the vignette: "italic('VCAM1')" and result from my data: "italic('CARS1')" As I am running against time be…

Comment: Can Differential Isoform expression analysis can be performed using DESeq2 packa by priyanka.m • 0

Thank you for the suggestions. I will try to compare my results and accordingly interpret the two.

Answer: [sva] Error in density.default(x, adjust = adj) : 'x' contains missing values by wahaha • 0

I found the reason, because some gene expression levels are 0 in all samples. you can add these code to check the data: >exp_mean <- appl…

Answer: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

The comment from @mikelove about specifying numeric contrasts answered my question. This code is not standalone, but I will leave it here i…

Comment: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

Thank you, @mikelove - that did it! The results make sense now. From my original post, could you clarify what the `group1w.sexfemale` contr…

Votes

Answer: DESeq2 how to specify contrast to test difference of differences

Comment: DESeq2 how to specify contrast to test difference of differences

Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a

Answer: biomaRt error unable to fix: need help troubleshooting

Answer: edgeR : results from goana and kegga functions show opposite sig. p-value

Awards • All

Scholar to Nicole • 0

Teacher to Michael Love 37k