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R session aborted: prcomp
Biobase stats
updated 3 months ago by 3.2k • written 4 months ago by • 0
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Job: Two Post-doctoral Positions at University of Campinas
post-doc job stats computational biology Job
4.9 years ago Benilton Carvalho ★ 4.3k
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Job: Data Scientist / Bioinformatician / Statistician at University of California
R python stats bioinformatics perl Job
5.0 years ago clif.duhn • 0
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getting a matrix with diagonal =1
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updated 5.5 years ago by ★ 27k • written 5.5 years ago by ▴ 40
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ribosome profiling analysis with different dispersions
deseq2 linear model ribosome profiling stats
updated 6.0 years ago by 7.6k • written 6.0 years ago by ▴ 90
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Memory management in R
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updated 6.3 years ago by 25k • written 6.3 years ago by ▴ 30
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Download the stats of Bioconductor
bioconductor stats
6.5 years ago Lluís Revilla Sancho ▴ 650
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Comment: Best practice for quantifying sncRNA by Abhishek • 0
I wonder what would be a good metric to assess the quantification quality
Comment: Best practice for quantifying sncRNA by Abhishek • 0
Thank you for sharing your thoughts. I used Salmon and indexed using hg38 gencodes transcriptome. After the tximport step, I ended up gett…
Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Ming ▴ 350
Thx so much for the diagnosis and advice. Indeed, in my data, some genes have all 0 for all sampes of a contrast for both "Mut" and "WT" gr…
Comment: Best practice for quantifying sncRNA by Steve Lianoglou 13k
> It's my opinion that miRNA is a mirage intended to make MDs salivate and biostatisticians wail in misery, but what do I know? I'll tell …
Comment: Idea: Using DESeq2 to test a change in ratio of two genes by Michael Love 33k
Yes, it's true that we take the reference gene(s) as a noise free measurement of the reference variation with this approach, and control ag…
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Comment: Idea: Using DESeq2 to test a change in ratio of two genes
Time Series Analysis
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
Answer: Time series DE gene analysis with edgeR where specific timepoints have NA levels
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