Bioconductor Timecoursedata

Showing : timecoursedata • reset

votes

replies

1.3k

views

DESeq2 timecoursedata GeneExpression

updated 17 months ago by ATpoint ★ 5.0k • written 17 months ago by pangtaihin • 0

votes

replies

969

views

DESeq2 ImpulseDE2 timecour timecoursedata moanin

18 months ago Aurora • 0

votes

replies

2.3k

views

timecoursedata limma

2.2 years ago • updated 23 months ago triZZla • 0

vote

replies

3.4k

views

time-series DESeq2 RNASeq timecoursedata TimeCourse

updated 2.2 years ago by ATpoint ★ 5.0k • written 2.2 years ago by Debebe • 0

votes

1.3k

views

RNASeqData TimeCourse DESeq2 timecoursedata

updated 16 months ago by Michael Love 43k • written 2.3 years ago by georgii.vdovin • 0

votes

replies

764

views

timecoursedata edgeR

updated 2.6 years ago by Gordon Smyth 53k • written 2.6 years ago by boczniak767 ▴ 740

votes

replies

1.1k

views

DESeq2 timecoursedata replicates

updated 2.7 years ago by Michael Love 43k • written 2.7 years ago by fepesanz8 • 0

votes

1.0k

views

DESeq2 time-series timecoursedata timecourse multifactorial

updated 2.9 years ago by Michael Love 43k • written 3.0 years ago by arshad1292 • 0

votes

replies

1.4k

views

QTL fourier TimeSeriesExperiment timecoursedata

4.6 years ago Daphne • 0

votes

replies

2.0k

views

limma proteomics TMTlabeling timecoursedata

updated 5.0 years ago by SamGG ▴ 360 • written 5.0 years ago by maleknias • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

Comment: deseq2 filter the low counts by Michael Love 43k

Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering

Votes

Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

Answer: Important: Bioconductor Release 3.22 Delayed

Awards • All