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translation
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News:
Translation Hackathon (community event) announcement
event
translation
community
2.7 years ago
kozo.nishida
• 0
0
votes
0
replies
1.0k
views
Bioconductor: Ambiguous Amino Acids & Gap Sequences
Translation
Biostrings
3.6 years ago
emmanuel.verde2939
• 0
0
votes
1
reply
1.2k
views
aaVariation function bug (Methonine instead of Leucine)
customprodb
translation
updated 6.6 years ago by
xiaojing.wang
▴ 50 • written 6.9 years ago by
georges.bedran
• 0
0
votes
1
reply
1.1k
views
Point mutation to corresponding amino acid
point mutation
aminoacid
translation
updated 17 months ago by
jtremblay514
• 0 • written 6.7 years ago by
chandu.ncbs
• 0
1
vote
2
replies
6.6k
views
translate DNA sequence to Amino acid sequence in a dataframe
translation
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
XIA.PAN
▴ 20
0
votes
5
replies
6.7k
views
How to reverse translate amino acid sequence into mammalian codon optimised cDNA
convert
translation
written 10.3 years ago by
tomas.bjorklund
▴ 20
0
votes
0
replies
1.2k
views
Translate to aminoacid, align pairwise and un-translate back to DNA
translation
pairwisealignment
8.6 years ago
igferres
• 0
4
votes
5
replies
3.7k
views
How to find the amino acid codon corresponding to a translated genomic position
genomicranges
genomicfeatures
translation
updated 13 months ago by
russ.bainer
▴ 10 • written 9.3 years ago by
madsheilskov
▴ 10
0
votes
0
replies
1.8k
views
Job:
Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer
translation
ngs
genomics
Job
10.0 years ago
jhjohnsn
• 0
9 results • Page
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Answer: Use of org.Rn.eg.db with GRCr8 reference genome
by
James W. MacDonald
68k
You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
Erika
• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
Answer: Clarification on GOALL / GO2ALLORFs mapping
by
James W. MacDonald
68k
It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
by
DavideSant
• 0
Thank you, this was super useful!
Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
Votes
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
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xiaofeiwang198266
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James W. MacDonald
68k
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