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vignette
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Excluding samples as referenced in SummarizedExperiment vignette
SummarizedExperiment
vignette
3.8 years ago
BioInfoBeginnerrr
• 0
4
votes
5
replies
3.1k
views
Error in the vignette for biomaRt (when accessing an ensembl archive)
biomaRt
vignette
updated 4.7 years ago by
ashleymaeconard
▴ 10 • written 6.1 years ago by
Russ Hyde
▴ 10
2
votes
2
replies
1.5k
views
How to write the installation section in the vignette of a package that has not been sent into Bioconductor yet
newpackage
vignette
installation
updated 6.2 years ago by
shepherl
4.2k • written 6.2 years ago by
Krutik Patel
▴ 10
0
votes
1
reply
1.3k
views
Error executing flowcore vignette
flowcore
vignette
software error
updated 8.2 years ago by
Jiang, Mike
★ 1.3k • written 8.2 years ago by
Robert Baer
▴ 70
7
votes
2
replies
1.8k
views
Duplicated author affiliations in BiocStyle-based HTML document
biocstyle
vignette
updated 8.4 years ago by
Andrzej Oleś
▴ 750 • written 8.4 years ago by
Aaron Lun
★ 29k
0
votes
3
replies
3.1k
views
unable to connect to 'string.uzh.ch' on port 80
STRINGdb
vignette
updated 8.6 years ago by
Gregor Rot
▴ 10 • written 8.6 years ago by
mwinerip
• 0
3
votes
3
replies
2.3k
views
Error running CellMix SampleAnalysis vignette
software error
cellmix
vignette
expressionset
8.9 years ago
gabor.halasz
• 0
2
votes
3
replies
2.8k
views
No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 9.9 years ago by
aaron
▴ 10 • written 9.9 years ago by
timothypyork
• 0
1
vote
2
replies
2.1k
views
GitHub Continuous Integration, unit-tests, vignettes: R Packaging
github
vignette
test
developers
updated 10.0 years ago by
Dan Tenenbaum
★ 8.2k • written 10.0 years ago by
anthonycolombo60
• 0
3
votes
2
replies
2.0k
views
question regarding embedding images in vignette when creating bioconductor package
vignette
updated 10.4 years ago by
Dan Tenenbaum
★ 8.2k • written 10.4 years ago by
KB
▴ 50
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Comment: Bioinformatician at the Lausanne University Hospital
by
eja.ger.m
• 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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