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wateRmelon
•
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1.0k
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A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation
wateRmelon
Computation
minfi
3.4 years ago
calen.p.ryan
• 0
0
votes
7
replies
1.7k
views
Getting wrong rownames of MSet object when using pfilter from watermelon
wateRmelon
Illumina EPIC
pfilter
updated 6.1 years ago by
lschal
• 0 • written 6.1 years ago by
anne-kristin.stavrum
• 0
1
vote
3
replies
2.2k
views
Combining pfilter (wateRmelon) and preprocessNoob (minfi)
wateRmelon
minfi
methylation
pfilter
preprocessNoob
updated 6.4 years ago by
tgorri
▴ 10 • written 6.4 years ago by
sara.blocquiaux
• 0
0
votes
0
replies
1.7k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation
ENmix
BMIQ
wateRmelon
6.9 years ago
moldach
▴ 20
0
votes
1
reply
2.1k
views
MethylSet to MethyLumiSet
minfi
methylumi
watermelon
8.9 years ago
Tom
▴ 10
0
votes
5
replies
3.0k
views
Different errors when attempting to normalize using wateRmelon (v1.1.18)
wateRmelon
methylation
EPIC
normalization
9.0 years ago
Wade Davis
▴ 60
0
votes
2
replies
2.1k
views
Error while using BMIQ normalisation on a methylumiSet
limma
watermelon
methylumi
bmiq
updated 9.1 years ago by
tgorri
▴ 10 • written 9.1 years ago by
poojitha.stemcell
▴ 10
1
vote
2
replies
2.4k
views
QC/normalization standards for cancer studies with 450k array data
minfi
watermelon
cancer
450k
normalization
updated 10.5 years ago by
Kasper Daniel Hansen
★ 6.5k • written 10.5 years ago by
metamaden
▴ 10
0
votes
3
replies
2.7k
views
minfi getProbeInfo error ( was WateRmelon betaqn error)
watermelon
betaqn
pfilter
getProbeInfo
minfi
10.9 years ago
gctromp
▴ 10
0
votes
10
replies
3.1k
views
MethyLumiM to MethyLumiSet?
convert
lumi
methylumi
minfi
wateRmelon
convert
lumi
methylumi
minfi
wateRmelon
updated 12.2 years ago by
Tim Triche
★ 4.2k • written 12.2 years ago by
Martin Rijlaarsdam
▴ 190
10 results • Page
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For differential analysis tools like DiffTF and TOBIAS, the standard and statistically sound approach is to create **one large consensus pe…
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