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0
votes
2
replies
1.1k
views
ChIP-seq or CUT&RUN enrichment
ChIPQC
ChIPpeakAnno
2.9 years ago
Bogdan
▴ 670
0
votes
0
replies
1.0k
views
about monocle3
monocle3
3.2 years ago
Bogdan
▴ 670
0
votes
0
replies
2.0k
views
Comment:
Comment: AnnotationDbi
3.2 years ago
Bogdan
▴ 670
0
votes
2
replies
2.0k
views
AnnotationDbi
AnnotationDbi
3.2 years ago
Bogdan
▴ 670
0
votes
0
replies
2.9k
views
Comment:
Comment: TCL/TK in R
3.2 years ago
Bogdan
▴ 670
0
votes
1
reply
2.9k
views
Comment:
Comment: TCL/TK in R
3.2 years ago
Bogdan
▴ 670
0
votes
8
replies
2.9k
views
TCL/TK in R
TCL/TK
3.2 years ago
Bogdan
▴ 670
0
votes
0
replies
2.9k
views
Comment:
Comment: TCL/TK in R
3.2 years ago
Bogdan
▴ 670
0
votes
1
reply
2.9k
views
Comment:
Comment: TCL/TK in R
3.2 years ago
Bogdan
▴ 670
0
votes
0
replies
695
views
packages for integrative genomics
genomics
integrative
GenomicSequence
3.3 years ago
Bogdan
▴ 670
0
votes
0
replies
926
views
Comment:
Comment: gene ontologies for a set of genes
3.4 years ago
Bogdan
▴ 670
1
vote
2
replies
926
views
gene ontologies for a set of genes
gene
ontology
3.4 years ago
Bogdan
▴ 670
0
votes
0
replies
4.6k
views
Comment:
Comment: extracting the KEGG pathway for a set of genes
3.4 years ago
Bogdan
▴ 670
0
votes
1
reply
4.6k
views
Comment:
Comment: extracting the KEGG pathway for a set of genes
3.4 years ago
Bogdan
▴ 670
0
votes
1
reply
909
views
Comment:
Comment: identifying trends in RNA-seq data
3.4 years ago
Bogdan
▴ 670
0
votes
6
replies
4.6k
views
extracting the KEGG pathway for a set of genes
Pathways
KEGG
3.4 years ago
Bogdan
▴ 670
0
votes
3
replies
909
views
identifying trends in RNA-seq data
RNASeq
trend
updated 3.4 years ago by
ATpoint
★ 4.6k • written 3.4 years ago by
Bogdan
▴ 670
0
votes
0
replies
21k
views
Comment:
Comment: about MapIds function
3.5 years ago
Bogdan
▴ 670
5
votes
2
replies
21k
views
about MapIds function
mapIds
3.5 years ago
Bogdan
▴ 670
0
votes
0
replies
650
views
visualization of circRNA
circRNA
circRNAprofiler
3.5 years ago
Bogdan
▴ 670
0
votes
0
replies
923
views
display .CT files in a BioC package
RNAinteract
rnaseqGene
RNASeqRData
rnaseqcomp
3.9 years ago
Bogdan
▴ 670
6
votes
5
replies
2.1k
views
to extract the mRNA sequences of the canonical RefSeq genes
Biostrings
4.1 years ago
Bogdan
▴ 670
0
votes
0
replies
2.1k
views
Comment:
Comment: to extract the mRNA sequences of the canonical RefSeq genes
4.1 years ago
Bogdan
▴ 670
0
votes
0
replies
2.1k
views
Comment:
Comment: to extract the mRNA sequences of the canonical RefSeq genes
4.1 years ago
Bogdan
▴ 670
0
votes
1
reply
785
views
a BioC/R package that display the genome sequence/ mRNA exons/protein domains
AnnotationHubData
updated 4.1 years ago by
Kevin Blighe
★ 4.0k • written 4.1 years ago by
Bogdan
▴ 670
0
votes
0
replies
2.0k
views
Comment:
C: analysis of FACS data using BioC
4.3 years ago
Bogdan
▴ 670
0
votes
1
reply
2.0k
views
Comment:
C: analysis of FACS data using BioC
4.3 years ago
Bogdan
▴ 670
0
votes
0
replies
2.0k
views
Comment:
C: analysis of FACS data using BioC
4.3 years ago
Bogdan
▴ 670
0
votes
1
reply
2.0k
views
Comment:
C: analysis of FACS data using BioC
4.3 years ago
Bogdan
▴ 670
5
votes
10
replies
2.0k
views
analysis of FACS data using BioC
facs
prada
flowstats
4.3 years ago
Bogdan
▴ 670
0
votes
0
replies
846
views
clustering of scRNAseq gene expression at multiple time points
scRNA-seq
time series
4.5 years ago
Bogdan
▴ 670
0
votes
0
replies
1.4k
views
Comment:
C: extracting the genes associated with a specific pathway
4.6 years ago
Bogdan
▴ 670
0
votes
0
replies
1.4k
views
Comment:
C: extracting the genes associated with a specific pathway
4.6 years ago
Bogdan
▴ 670
0
votes
3
replies
1.4k
views
extracting the genes associated with a specific pathway
pathway
KEGG
annotation
annotationhub
updated 4.6 years ago by
James W. MacDonald
67k • written 4.6 years ago by
Bogdan
▴ 670
1
vote
1
reply
806
views
a package with randomization/permutation tests for genomic analyses
normalization
4.8 years ago
Bogdan
▴ 670
0
votes
0
replies
613
views
permutation and randomization tests
permutation
randomization
4.9 years ago
Bogdan
▴ 670
0
votes
1
reply
2.3k
views
Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.9 years ago
Bogdan
▴ 670
0
votes
0
replies
2.3k
views
Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.9 years ago
Bogdan
▴ 670
0
votes
0
replies
2.3k
views
Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.9 years ago
Bogdan
▴ 670
3
votes
11
replies
2.3k
views
normalization methods for scRNA-seq and RNA-seq in specific cases of increased global transcription
RNA-seq
scRNA-seq
updated 4.9 years ago by
Aaron Lun
★ 28k • written 4.9 years ago by
Bogdan
▴ 670
0
votes
0
replies
2.3k
views
Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.9 years ago
Bogdan
▴ 670
0
votes
1
reply
2.3k
views
Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.9 years ago
Bogdan
▴ 670
0
votes
0
replies
1.8k
views
Comment:
C: analysis of multiple time points * 2 replicates of scRNA-seq
4.9 years ago
Bogdan
▴ 670
0
votes
5
replies
1.8k
views
analysis of multiple time points * 2 replicates of scRNA-seq
scRNAseq
updated 4.9 years ago by
Aaron Lun
★ 28k • written 4.9 years ago by
Bogdan
▴ 670
0
votes
0
replies
915
views
Comment:
C: scRNA-seq analysis : the IDENTITY of the CLUSTERS across MULTIPLE EXPERIMENTS
5.0 years ago
Bogdan
▴ 670
4
votes
2
replies
915
views
scRNA-seq analysis : the IDENTITY of the CLUSTERS across MULTIPLE EXPERIMENTS
scRNA-seq
updated 5.0 years ago by
Aaron Lun
★ 28k • written 5.0 years ago by
Bogdan
▴ 670
0
votes
6
replies
2.1k
views
analysis of multiple batches and multiple treatment conditions in scRNA-seq
limma
deseq2
edger
scRNAseq
combat
updated 5.4 years ago by
Andrew_McDavid
▴ 270 • written 5.4 years ago by
Bogdan
▴ 670
0
votes
0
replies
2.1k
views
Comment:
C: analysis of multiple batches and multiple treatment conditions in scRNA-seq
5.4 years ago
Bogdan
▴ 670
0
votes
1
reply
2.1k
views
Comment:
C: analysis of multiple batches and multiple treatment conditions in scRNA-seq
5.4 years ago
Bogdan
▴ 670
0
votes
0
replies
3.1k
views
Comment:
C: the coordinates of exons of RefSeq or ENSEMBL genes
5.4 years ago
Bogdan
▴ 670
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