Bioconductor Annotation

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308

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 15 days ago by Tim Peters ▴ 170 • written 23 days ago by s.malik • 0

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192

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clusterProfiler annotation gseGO gsea OrgDb

updated 4 weeks ago by Guido Hooiveld ★ 3.9k • written 4 weeks ago by enee ▴ 10

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153

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ChIPSeq annotation ChIPpeakAnno

11 weeks ago nilanjanamani88 • 0

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2.0k

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Annotation affy oligo ffpe Annotation affy oligo ffpe

written 10.3 years ago by Guest User ★ 13k

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4.2k

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annotation

written 8.8 years ago by seeker • 0

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443

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Annotation annotate DifferentialMethylation minfiDataEPIC

updated 7 months ago by Basti ▴ 780 • written 7 months ago by titangerd • 0

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373

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db0 release Annotation

7 months ago kayla.interdonato ▴ 160

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3.4k

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Bioconductor Annotation Ann

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by Aytaç • 0

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658

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MicroRNAArrayData GSE97562 pd.hugene.1.0.st.v1 Annotation

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by rodj5201 • 0

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916

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Annotation biomaRt

11 months ago • updated 10 months ago RuBBiT0 ▴ 10

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697

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IlluminaHumanMethylationEPICmanifest ChAMP annotation

updated 11 months ago by James W. MacDonald 65k • written 11 months ago by Matilda • 0

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1.1k

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Annotation

11 months ago Michael Steinbaugh ▴ 90

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954

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Annotation biomaRt ensembldb

written 2.4 years ago by Lillian • 0

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2.0k

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ChIPQC annotation rn6

updated 4 months ago by Raghavaram • 0 • written 3.6 years ago by Frédéric Crémazy • 0

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1.6k

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software error annotation

written 4.1 years ago by alan.g.hudson • 0

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1.4k

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Annotation pathview Annotation pathview

written 9.7 years ago by Luo Weijun ★ 1.6k

16 results • Page 1 of 1

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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0