Bioconductor Annotation

Showing : Annotation • reset

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4.2k

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annotation

written 8.9 years ago by seeker • 0

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2.0k

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ChIPQC annotation rn6

updated 4 months ago by Raghavaram • 0 • written 3.6 years ago by Frédéric Crémazy • 0

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339

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 26 days ago by Tim Peters ▴ 180 • written 4 weeks ago by s.malik • 0

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2.0k

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Annotation affy oligo ffpe Annotation affy oligo ffpe

written 10.3 years ago by Guest User ★ 13k

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1.6k

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software error annotation

written 4.2 years ago by alan.g.hudson • 0

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679

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MicroRNAArrayData GSE97562 pd.hugene.1.0.st.v1 Annotation

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by rodj5201 • 0

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1.2k

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Annotation

12 months ago • updated 11 months ago Michael Steinbaugh ▴ 90

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939

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Annotation biomaRt

11 months ago RuBBiT0 ▴ 10

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714

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IlluminaHumanMethylationEPICmanifest ChAMP annotation

updated 12 months ago by James W. MacDonald 65k • written 12 months ago by Matilda • 0

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1.4k

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Annotation pathview Annotation pathview

written 9.8 years ago by Luo Weijun ★ 1.6k

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970

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Annotation biomaRt ensembldb

written 2.5 years ago by Lillian • 0

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468

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Annotation annotate DifferentialMethylation minfiDataEPIC

updated 7 months ago by Basti ▴ 780 • written 7 months ago by titangerd • 0

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213

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clusterProfiler annotation gseGO gsea OrgDb

updated 6 weeks ago by Guido Hooiveld ★ 3.9k • written 6 weeks ago by enee ▴ 10

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3.5k

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Bioconductor Annotation Ann

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by Aytaç • 0

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404

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db0 release Annotation

7 months ago kayla.interdonato ▴ 160

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172

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ChIPSeq annotation ChIPpeakAnno

12 weeks ago nilanjanamani88 • 0

16 results • Page 1 of 1

Recent ...

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Answer: Trim/Filter out-of-bounds GRanges

Comment: Help with running egsea()

Answer: How to save the DEXSeq results

Awards • All

Scholar to Michael Love 41k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k