Showing : BLAST • reset
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Visualize blastx output in R
blast
2.9 years ago kvigil • 0
1
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2
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1.9k
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blastn for selected database and/or organism
blast blastsequences
updated 7.7 years ago by 68k • written 7.7 years ago by ▴ 40
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1.3k
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batch blast matrix of protein sequences from R
R blast blastsequences protein
8.0 years ago andres.susrud • 0
1
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2
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2.8k
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blastSequences queries failing due to BLAST switch to https?
annotate blastSequences BLAST https
updated 9.3 years ago by 25k • written 9.3 years ago by • 0
3
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8
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10k
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Which package to run blast
blast
updated 9.4 years ago by ★ 1.6k • written 9.4 years ago by ▴ 20
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After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings blast variantannotation
9.4 years ago li lilingdu ▴ 450
0
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1
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2.2k
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Primer-blast with bioconductor packages
primer blast
updated 9.7 years ago by 16k • written 9.7 years ago by ▴ 40
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5
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7.4k
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Blastp - through R
blast R
9.9 years ago maahpishanu • 0
4
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13
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6.1k
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How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation blast biostrings
updated 10.5 years ago by 25k • written 10.5 years ago by • 0
2
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2
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2.4k
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BLAST export library 'annotate'
blast annotate biostrings export fasta
11.2 years ago b.stielow • 0
4
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3
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5.8k
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Use R/Bioconductor to match BLAST hits to GO terms?
GO BLAST annotation
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by ▴ 270
11 results • Page 1 of 1
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Comment: Joining different datasets and analyzing using the group-specific condition effe by jason.chai • 0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
Comment: Questions about bacon QC and correction on EWAS results by sup0903 • 0
This is qq plot and histogram generated before bacon correction ![enter image description here][1] ![enter image description here][2] …
Comment: Ensembl site unresponsive via biomaRt by sebastianenewell • 0
> I think this is an unrelated issue. The original post includes the > message Error: 'curl_parse_url' is not an exported object from > 'na…
Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
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