Showing : blast • reset
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blastn for selected database and/or organism
blast blastsequences
updated 3.3 years ago by 58k • written 3.4 years ago by ▴ 40
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389
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batch blast matrix of protein sequences from R
R blast blastsequences protein
3.6 years ago andres.susrud • 0
1
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2
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1.3k
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blastSequences queries failing due to BLAST switch to https?
annotate blastSequences BLAST https
updated 4.9 years ago by 25k • written 4.9 years ago by • 0
3
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8
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5.8k
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Which package to run blast
blast
updated 5.1 years ago by ★ 1.5k • written 5.1 years ago by ▴ 20
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518
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After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings blast variantannotation
5.1 years ago li lilingdu ▴ 450
0
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1
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801
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Primer-blast with bioconductor packages
primer blast
updated 5.3 years ago by 15k • written 5.3 years ago by ▴ 40
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5
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3.0k
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Blastp - through R
blast R
5.6 years ago maahpishanu • 0
4
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How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation blast biostrings
updated 6.2 years ago by 25k • written 6.2 years ago by • 0
2
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2
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1.0k
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BLAST export library 'annotate'
blast annotate biostrings export fasta
6.8 years ago b.stielow • 0
4
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3
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3.1k
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Use R/Bioconductor to match BLAST hits to GO terms?
GO BLAST annotation
updated 6.9 years ago by ★ 7.2k • written 7.0 years ago by ▴ 180
10 results • Page 1 of 1
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Comment: Diffbind dba.plotProfile attempt to select less than one element in OneIndex by bhanratt • 0
``` > DBA 10 Samples, 31953 sites in matrix: ID Tissue Factor Condition Replicate Reads FRiP 1 58 1 H3K4me3 AD …
Answer: Warning messages on Apple M1 BigSur by Vincent J. Carey, Jr. 6.5k
We are not producing M1 binaries at this time. If you use the intel version of R under Rosetta 2 you can use the intel mac binaries.
Comment: Issue::DesignPrimers DECIPHER by slwmartin • 0
Hey, I'm having this issue too. I've tried reinstalling using Conda a few times without luck. Did you reinstall with Conda or from the tar …
Comment: Log fold change interpretation of time series with Wald test by jd348 • 0
So would you recommend still using Log2fold change as a measurement for effect size?
Answer: Error in `*tmp*`$samples : $ operator is invalid for atomic vectors by James W. MacDonald 58k
I believe you want ``` > x <- as.matrix(read.delim("E:/bioinformatic/RNAseq/GSE168008_raw_count.txt", sep ="" ,row.names = 1)) > sampl…
Votes
Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2
Answer: Log fold change interpretation of time series with Wald test
A: gviz: name of tracks disappeas
Answer: Degust: what normalization method does it use
Answer: ylim and xlim in Enhanced Volcano
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