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BLAST
•
reset
0
votes
0
replies
363
views
Visualize blastx output in R
blast
15 months ago
kvigil
• 0
1
vote
2
replies
1.3k
views
blastn for selected database and/or organism
blast
blastsequences
updated 6.0 years ago by
James W. MacDonald
65k • written 6.0 years ago by
aush
▴ 40
0
votes
0
replies
930
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
6.3 years ago
andres.susrud
• 0
1
vote
2
replies
2.2k
views
blastSequences queries failing due to BLAST switch to https?
annotate
blastSequences
BLAST
https
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
ariel.hecht
• 0
3
votes
8
replies
8.3k
views
Which package to run blast
blast
updated 7.7 years ago by
Malcolm Cook
★ 1.6k • written 7.7 years ago by
biomiha
▴ 20
0
votes
0
replies
850
views
After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings
blast
variantannotation
7.7 years ago
li lilingdu
▴ 450
0
votes
1
reply
1.5k
views
Primer-blast with bioconductor packages
primer
blast
updated 8.0 years ago by
Hervé Pagès
16k • written 8.0 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
5
replies
5.5k
views
Blastp - through R
blast
R
8.3 years ago
maahpishanu
• 0
4
votes
13
replies
4.4k
views
How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation
blast
biostrings
updated 8.8 years ago by
Martin Morgan
25k • written 8.8 years ago by
Mathilde
• 0
2
votes
2
replies
1.8k
views
BLAST export library 'annotate'
blast
annotate
biostrings
export
fasta
9.5 years ago
b.stielow
• 0
4
votes
3
replies
4.8k
views
Use R/Bioconductor to match BLAST hits to GO terms?
GO
BLAST
annotation
updated 9.6 years ago by
Marc Carlson
★ 7.2k • written 9.6 years ago by
Jon Bråte
▴ 250
11 results • Page
1 of 1
Recent ...
Replies
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Comment: deseq2 results
by
ATpoint
★ 4.1k
> the results are not satisfactory to me Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★ 4.1k
It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
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to
Robert Castelo
★ 3.3k
Popular Question
to
Gyan Prakash Mishra
▴ 10
Popular Question
to
Gordon Smyth
50k
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to
WouterDeCoster
▴ 130
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to
Michael Love
42k
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