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Chromosome
•
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0
votes
2
replies
1.5k
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How to find the number of protein-coding genes in each chromosome arm in human?
gene
chromosome
proteincodinggene
2.6 years ago
Liliian
• 0
3
votes
5
replies
2.8k
views
Splitting a TxDB or GRanges by Chromosome
GenomicRanges
split
chromosome
TxDb
updated 3.9 years ago by
Hervé Pagès
16k • written 3.9 years ago by
jon.klonowski
▴ 40
5
votes
4
replies
16k
views
Getting rs ids using chr coordinates | Biomart
SNP
rs id
Biomart
Chromosome
coordinates
updated 2.3 years ago by
James W. MacDonald
68k • written 5.2 years ago by
Mahan
• 0
0
votes
4
replies
1.1k
views
Genomic Annotation Package Ensembl
Chromosome
Annotation
updated 5.3 years ago by
James W. MacDonald
68k • written 5.3 years ago by
Bine
▴ 50
0
votes
2
replies
1.2k
views
Parsing error creating tx2gene object for tximport
tximport
GCF feature table
parsing error
chromosome
updated 5.6 years ago by
Michael Love
43k • written 5.6 years ago by
knholm
• 0
0
votes
0
replies
870
views
Conversion of RefSeq data to chromosomal position
RefSeq
Chromosome
Mutalyzer
5.6 years ago
heiko_kin
▴ 60
1
vote
1
reply
797
views
Differential Expression by Chromosome using edgeR
edgeR
chromosome
RNAseq
updated 5.6 years ago by
swbarnes2
★ 1.4k • written 5.6 years ago by
missmoparker
• 0
0
votes
1
reply
1.1k
views
Understand the chromosome name in homo sapiens gene database
homo sapiens
chromosome
updated 7.4 years ago by
James W. MacDonald
68k • written 7.4 years ago by
xchen8
• 0
2
votes
3
replies
2.9k
views
What's the best way to retrieve the sizes (lengths) of chromosomes for a reference genome assembly?
bsgenome
chromosome
reference genome
updated 7.7 years ago by
Hervé Pagès
16k • written 7.7 years ago by
Nathan Sheffield
▴ 10
1
vote
5
replies
3.2k
views
how to plot human genome chromosome Ideogram with each length by Gviz
Gviz
chromosome
ideogram
updated 8.7 years ago by
bernatgel
▴ 150 • written 8.7 years ago by
dulunar
▴ 10
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Answer: Important: Bioconductor Release 3.22 Delayed
by
oliviamillerama
• 0
I completely understand delays like this because technical issues can happen anytime. It feels a bit like [Draw Climber][1] when one small …
Comment: VariantAnnotation does escape = within header string quotes
by
Daniel Cameron
▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data
by
Alexander
• 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Comment: featureCounts -L: high unassigned:mapq fraction
by
eja.gssssssse.r.m
• 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Kevin Blighe
★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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