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News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
10 days ago Maria Doyle ▴ 90
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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
5 weeks ago Maria Doyle ▴ 90
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News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
8 weeks ago Maria Doyle ▴ 90
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333
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News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
8 weeks ago Maria Doyle ▴ 90
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304
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News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
9 weeks ago Maria Doyle ▴ 90
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BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
10 weeks ago Maria Doyle ▴ 90
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News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
11 weeks ago Maria Doyle ▴ 90
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
12 weeks ago Maria Doyle ▴ 90
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News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
3 months ago Maria Doyle ▴ 90
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News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
4 months ago Maria Doyle ▴ 90
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EuroBioC2024 Registration is Open!
Community Conference Bioconductor EuroBioC2024
5 months ago Maria Doyle ▴ 90
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News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024 Conference Bioconductor Community
5 months ago Maria Doyle ▴ 90
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News: BioC2024 deadlines approaching
BioC2024 Bioconductor Community
6 months ago Maria Doyle ▴ 90
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News: BioC2024 registration is now open!
BioC2024 Conference Bioconductor Community
8 months ago Maria Doyle ▴ 90
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News: Bioconductor.org website new design - We Need Your Input!
Bioconductor Community Website
15 months ago Maria Doyle ▴ 90
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
17 months ago Maria Doyle ▴ 90
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770
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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor Event Community Training
18 months ago Maria Doyle ▴ 90
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705
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training Bioconductor Event Community Tutorial
18 months ago Maria Doyle ▴ 90
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training Bioconductor Event Community News
18 months ago Maria Doyle ▴ 90
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News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
updated 4 months ago by • 0 • written 18 months ago by ▴ 90
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 11 weeks ago by • 0 • written 21 months ago by ▴ 90
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News: EuroBioC2023 abstract submission is open!
presentation EuroBioC2023 Conference community Bioconductor
updated 5 weeks ago by • 0 • written 20 months ago by ▴ 90
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News: Bioconductor call for events!
Bioconductor events community
20 months ago Maria Doyle ▴ 90
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News: Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor CAB bioconductoroversight community
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News: Seeking members for BioC2023 organizing committee
BioC2023 Bioconductor community
21 months ago Maria Doyle ▴ 90
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News: Seeking Outreachy interns and project proposals
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21 months ago Maria Doyle ▴ 90
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News: Translation Hackathon (community event) announcement
event translation community
2.3 years ago kozo.nishida • 0
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Job: Bioconductor Community Manager
Community Teaching Bioconductor
2.5 years ago • updated 2.4 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
bioconductoroversight community CAB
2.7 years ago shepherl 4.1k
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community CAB
2.8 years ago • updated 2.7 years ago shepherl 4.1k
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820
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News: Call for Community Volunteered Package Reviewers
Community SinglePackageBuilder Reviews Bioconductor
3.3 years ago shepherl 4.1k
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News: Nominations for Bioconductor Technical Advisory Board are open
community Bioconductor
3.5 years ago Charlotte Soneson ▴ 170
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News: Community engagement, outreach, and diversity award
awards bioc2021 recognition community Bioconductor
3.5 years ago shepherl 4.1k
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News: New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight news community BiocVersion
3.6 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community BiocVersion news
updated 3.7 years ago by • 0 • written 3.8 years ago by ▴ 1000
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News: Community engagement and outreach award
bioconductor bioc2020 award community News
written 4.4 years ago by 4.1k
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1000
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News: Bioconductor Community Advisory Board Members
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4.6 years ago Matthew Ritchie ▴ 1000
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News: Bioconductor Community Advisory Board Nominees
news community bioconductor oversight News
updated 4.7 years ago by 21k • written 4.7 years ago by ▴ 1000
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News: Results: Bioconductor Community Survey
community feedback News
4.8 years ago Matthew Ritchie ▴ 1000
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1.2k
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News: Bioconductor Community Survey
feedback community News
5.1 years ago Matthew Ritchie ▴ 1000
40 results • Page 1 of 1
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Answer: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k
No, that's not a good idea at all. You should be doing a meta-analysis with these data rather than trying to combine like that. `GeneMeta` …
Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column by James W. MacDonald 67k
Check the help page for `KEGGFrame`. Your columns are out of order.
Comment: Question about using LRT test for time course experiments with DESeq2 by James W. MacDonald 67k
You are testing the interaction, so you are asking for those genes that change at any time *differently, depending on the treatment*. If co…
Comment: DESeq Input from Salmon + tximport/tximeta by LuciaNhu • 0
Thank you both. Special thanks from Prof. Michael Love. It's rare to find tool authors who respond to users so quickly and supportively. Ma…
Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0
Hi James, Yes, I understand that the p-values are with respect to the full versus reduced model comparison. However, the "genes that cha…
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Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Answer: DESeq Input from Salmon + tximport/tximeta
Answer: featureCounts segmentation fault with large chromosomes
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