Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ExpressionData
•
reset
3
votes
2
replies
772
views
Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
NanoStringNCTools
limma
ExpressionData
RNASeq
edgeR
9 months ago
mohammedtoufiq91
▴ 10
0
votes
1
reply
550
views
Time change in expression vs time change in phenotype
Transcriptomics
ExpressionData
DESeq2
updated 22 months ago by
Michael Love
43k • written 22 months ago by
Ivan
• 0
0
votes
2
replies
855
views
Doubt about expression data as well as assay
GEOquery
ExpressionData
assay
SummarizedExperiment
ExpressionAtlas
updated 23 months ago by
pmadrigal
• 0 • written 23 months ago by
Kritikaverma2707
• 0
3
votes
2
replies
782
views
please resolve the issue
gene
ExpressionData
updated 23 months ago by
James W. MacDonald
68k • written 23 months ago by
sonal
• 0
1
vote
2
replies
3.7k
views
R: Confused about Limma R package output being LogFC or Log2FC
limma
R
ExpressionData
updated 2.0 years ago by
Gordon Smyth
52k • written 2.1 years ago by
Keith
• 0
0
votes
3
replies
1.0k
views
expression data
ExpressionData
ExpressionNormalizationWorkflow
updated 2.4 years ago by
James W. MacDonald
68k • written 2.4 years ago by
Upasana
• 0
0
votes
0
replies
720
views
edgeR testing interactions between two factors while controlling for blocking factor
edgeR
ExpressionData
RNASeqData
2.9 years ago
Mafalda
• 0
0
votes
1
reply
923
views
HSMMSingleCell metadata
ExperimentHubData
ExpressionData
CellDataSet
RNASeqData
2.9 years ago
karl.stamm
▴ 10
2
votes
2
replies
1.0k
views
Could use some advice on analyzing ranks of expressed genes in two conditions,
GeneExpression
DESeq2
ExpressionData
updated 2.9 years ago by
fivescarynightsgames
• 0 • written 3.0 years ago by
reza
▴ 10
0
votes
3
replies
1.1k
views
Error in loading data set
ExpressionData
updated 3.1 years ago by
Basti
▴ 780 • written 3.1 years ago by
Muhammad
• 0
0
votes
0
replies
682
views
Gene expression changes in one condition
RNASeq
Gene
ExpressionData
3.3 years ago
AZ
▴ 30
0
votes
2
replies
2.1k
views
PCA and heatmaps: most variable genes selection
DESeq2
ExpressionData
heatmaps
pca
3.7 years ago
Clara
▴ 10
3
votes
2
replies
1.4k
views
NChannelSet --> eSet/expressionSet ? How to transform?
ExpressionData
ArrayExpress
updated 3.9 years ago by
Gordon Smyth
52k • written 3.9 years ago by
Gero
• 0
1
vote
3
replies
1.2k
views
DESeq analysis with Biological replicate.
DESeq2
ExpressionData
GeneExpression
updated 4.1 years ago by
Michael Love
43k • written 4.1 years ago by
Javad_Sadeghi
• 0
0
votes
0
replies
1.5k
views
Why is `scale-free topology` estimated as -sign(slope) * (R^2) in WGCNA?
Network
StatisticalMethod
WGCNA
ExpressionData
4.1 years ago
jol.espinoz
▴ 40
0
votes
1
reply
895
views
Function createExpressionSet: Creating an ExpressionSet - Which package needed?
ExpressionData
updated 4.2 years ago by
Michael Love
43k • written 4.2 years ago by
Bine
▴ 50
0
votes
0
replies
956
views
nested design with random factor and limma???
ExpressionData
limma
ExpressionData
limma
16.6 years ago
Gordon Smyth
52k
1
vote
0
replies
953
views
nested design with random factor and limma???
ExpressionData
limma
ExpressionData
limma
16.6 years ago
Bettina Kulle Andreassen
▴ 20
0
votes
0
replies
1.2k
views
How to display or output expression data with non-unique feature labels?
ExpressionData
ExpressionData
17.7 years ago
Kocherginsky, Masha [BSD] - HSD
▴ 10
0
votes
0
replies
1.4k
views
How to display or output expression data with non-unique feature labels?
Annotation
ExpressionData
Annotation
ExpressionData
17.7 years ago
Martin Morgan
25k
20 results • Page
1 of 1
Recent ...
Replies
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
It seems likely this was installed as an admin account and a user account would not be able to update. Someone with admin access should run…
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
by
James W. MacDonald
68k
Any query over the internet can vary in the time to completion due to the vagaries of the connection you may have. I just tried your query …
Answer: batch effect removal for agilent microarray data
by
James W. MacDonald
68k
If all of the samples in group 155 are one type, and all the other samples in 438 are the other, then no. The biological and technical vari…
Answer: Automatically install dependencies
by
shepherl
4.1k
Since `BiocManager::install` is a wrapper around `install.packages` you should be able to use the dependencies argument. Default is the de…
Comment: For some reason I can't update BiocManager to 3.20
by
azm.ana2
• 0
Sorry i apologize for the delay. Thank you very much for the answer. I have two supervisers and the one who knows about the computer is com…
Votes
A: How to extract DESeq2 results for an interaction design
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Awards
• All
Popular Question
to
daniel.carbajo
• 0
Popular Question
to
xiaofeiwang198266
• 0
Popular Question
to
maltethodberg
▴ 180
Popular Question
to
abadgerw
• 0
Popular Question
to
Jim Nemesh
▴ 10
Locations
• All
France,
1 minute ago
United Kingdom,
19 minutes ago
Seattle, WA, United States,
26 minutes ago
France,
32 minutes ago
United States,
1 hour ago
Traffic: 893 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6