Bioconductor GFF3

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dexseq python gtf gff3 annotation

5.4 years ago Raito92 ▴ 60

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annotation gff3 gff genome

updated 6.1 years ago by Michael Lawrence ★ 11k • written 6.1 years ago by mictadlo ▴ 10

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parclip bedtools bed files gff3

7.7 years ago linuxborg2 • 0

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txdb gff3 polycistronic transcript

7.9 years ago Piotr Gawronski • 0

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GenomicFeatures GFF3

updated 8.6 years ago by Valerie Obenchain ★ 6.8k • written 8.6 years ago by Dario Strbenac ★ 1.6k

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AnnotationHub Gencode GFF3 FASTA News

10.1 years ago Sonali Arora ▴ 390

6 results • Page 1 of 1

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Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0

The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…

Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

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Comment: Error Loading Experiment from SimBenchData Package

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

Answer: ordinary t from limma [was: How would I normally compare swirl?]

Comment: readDNAStringSet with non DNA characters

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Popular Question to James W. MacDonald 68k