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GenomeInfoDbData
•
reset
8
votes
9
replies
1.1k
views
All three of the sites where genomeinfodbdata R packages are stored appear to be down.
GenomeInfoDbData
8 months ago
15753563659
▴ 50
2
votes
10
replies
1.3k
views
can't open mghp.osn.xsede.org
GenomeInfoDbData
genomeinfodbdata
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
15753563659
▴ 50
1
vote
7
replies
4.5k
views
installation of package ‘GenomeInfoDbData’ had non-zero exit status
GenomeInfoDbData
"GenomeInfoDbData"package
updated 2.2 years ago by
Hervé Pagès
16k • written 3.5 years ago by
N.D.Hubot
• 0
1
vote
5
replies
1.3k
views
Unable to load mm10 genome for use with GenomicDistributions package
GenomeInfoDb
GenomeInfoDbData
GenomicDistributionsData
GenomicDistributions
22 months ago
rashford
• 0
1
vote
4
replies
4.0k
views
GenomeInfoDb’ could not be loaded or installed
GenomeInfoDbData
3.0 years ago
ettore64
▴ 10
1
vote
7
replies
17k
views
Dada2 and GenomeInfoDbData installation
dada2
GenomeInfoDbData
updated 6.8 years ago by
jiangjing_ing
• 0 • written 6.9 years ago by
navlern
• 0
0
votes
3
replies
1.6k
views
I cannot install "microbiome"
GenomeInfoDbData
microbiome
phyloseq
updated 21 months ago by
Marcel Ramos
690 • written 21 months ago by
kikiki
• 0
0
votes
1
reply
720
views
package ‘GenomeInfoDb’ could not be loaded
GenomeInfoDb
GenomeInfoDbData
updated 14 months ago by
ATpoint
★ 4.1k • written 14 months ago by
exferin
• 0
0
votes
14
replies
4.1k
views
GenomeInfoDbData had non-zero exit status
DESeq2
RStudio
GenomeInfoDbData
hadnon-zeroexitstatus
updated 19 months ago by
wshao9
• 0 • written 22 months ago by
JoseR
• 0
0
votes
1
reply
385
views
GenomeInfoDbData version 1.2.9
GenomeInfoDbData
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
remi.trimbour
• 0
0
votes
6
replies
1.5k
views
GenomeInfoDbData not available for Mac
bioconductor
GenomeInfoDbData
5.8 years ago
svetlana.gorokhova
• 0
0
votes
1
reply
1.8k
views
Issue using ballgown
software error
ballgown
genomeinfodbdata
genomeinfodb
updated 5.6 years ago by
James W. MacDonald
65k • written 5.6 years ago by
dualeahmed
• 0
0
votes
0
replies
607
views
Error installing GenomeInfoDbData in order to run DESeq2
genomeinfodbdata
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
hdwhitti
• 0
0
votes
2
replies
983
views
Error when installing pcaExplorer
install
GenomeInfoDbData
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
lina.bird
• 0
0
votes
4
replies
1.8k
views
Cannot install Phyloseq and dada2
GenomeInfoDbData
phyloseq
dada2
2.3 years ago
ymtan
• 0
15 results • Page
1 of 1
Recent ...
Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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