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Multiomics
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Job:
Job as a bioinformatician in Hamburg, Germany
DimensionReduction
SingleCellData
multiomics
MachineLearning
16 months ago
Diego's
• 0
1
vote
0
replies
749
views
Job:
Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics
Proteomics
Cancer
Statistics
Bioinformatics
21 months ago
Andy Lynch
▴ 120
0
votes
0
replies
827
views
Job:
Bioinformatics scientist (Full-time/Permanent) for the analysis of multiomics data in oncology
clinical
R
bioinformatics
multiomics
oncology
2.0 years ago
vincent.piras
• 0
0
votes
0
replies
1.1k
views
Job:
Post-doc position in multi-omics of Alzheimer's disease at Columbia University in New York City
JobPosting
postdoc
sequencing
multiomics
3.3 years ago • updated 3.2 years ago
lhd
• 0
0
votes
0
replies
816
views
Job:
Postdoc/Bioinformatician: Helsinki - Obesity Research Unit, University of Helsinki
multiomics
single-cell RNA
Job
4.5 years ago
mahes.muniandy
• 0
5
votes
4
replies
1.8k
views
Perform correlation analysis between miRNA and mRNA gene expression data on the same TCGA dataset based on the curatedTCGAData
curatedTCGAData
MultiAssayExperiment
multiomics
TCGA
updated 5.1 years ago by
Levi Waldron
★ 1.1k • written 5.1 years ago by
svlachavas
▴ 830
3
votes
1
reply
1.1k
views
Horizontal integration of multi omic data, with continuous dependent variable
multiassayexperiment
multiomics
updated 5.8 years ago by
Levi Waldron
★ 1.1k • written 5.8 years ago by
dberel
▴ 20
8
votes
5
replies
1.9k
views
Querying specific TCGA datasets through the MultiAssayExperiment R package
MultiAssayExperiment
curatedCRCdata
multiomics
TCGA
updated 5.8 years ago by
Marcel Ramos
690 • written 5.8 years ago by
svlachavas
▴ 830
8 results • Page
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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