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Multiomics
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Job:
Job as a bioinformatician in Hamburg, Germany
DimensionReduction
SingleCellData
multiomics
MachineLearning
9 months ago
Diego's
• 0
1
vote
0
replies
427
views
Job:
Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics
Proteomics
Cancer
Statistics
Bioinformatics
14 months ago
Andy Lynch
▴ 120
0
votes
0
replies
593
views
Job:
Bioinformatics scientist (Full-time/Permanent) for the analysis of multiomics data in oncology
clinical
R
bioinformatics
multiomics
oncology
17 months ago
vincent.piras
• 0
0
votes
0
replies
866
views
Job:
Post-doc position in multi-omics of Alzheimer's disease at Columbia University in New York City
JobPosting
postdoc
sequencing
multiomics
2.7 years ago • updated 2.6 years ago
lhd
• 0
0
votes
0
replies
628
views
Job:
Postdoc/Bioinformatician: Helsinki - Obesity Research Unit, University of Helsinki
multiomics
single-cell RNA
Job
4.0 years ago
mahes.muniandy
• 0
4
votes
4
replies
1.4k
views
Perform correlation analysis between miRNA and mRNA gene expression data on the same TCGA dataset based on the curatedTCGAData
curatedTCGAData
MultiAssayExperiment
multiomics
TCGA
updated 4.5 years ago by
Levi Waldron
1.1k • written 4.5 years ago by
svlachavas
▴ 810
3
votes
1
reply
909
views
Horizontal integration of multi omic data, with continuous dependent variable
multiassayexperiment
multiomics
updated 5.3 years ago by
Levi Waldron
1.1k • written 5.3 years ago by
dberel
▴ 20
8
votes
5
replies
1.6k
views
Querying specific TCGA datasets through the MultiAssayExperiment R package
MultiAssayExperiment
curatedCRCdata
multiomics
TCGA
updated 5.3 years ago by
Marcel Ramos
680 • written 5.3 years ago by
svlachavas
▴ 810
8 results • Page
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Comment: Suggested package missing from Development version of Bioconductor
by
Richard
• 0
I have just contacted the maintainer. Is it okay if I leave the package in Suggests for now and then remove it before the next Bioconductor…
Answer: shinyMethyl - saving the file
by
Guillaume Devailly
▴ 60
You can probably save individual plots by right-clicking on them an save individual images. Maybe printing the page as a pdf will also work…
Answer: Deseq2 calculated log2foldchange not consistent with RPM in IP-small RNA-seq
by
Michael Love
40k
Did you manually calculate RPMs? Try `fpm(dds)` for comparison, as this also uses DESeq2 median ratio scaling.
Comment: collapseReplicates error after tximeta
by
Michael Love
40k
A note: I've now changed collapseReplicates() to output a loud warning when it is run on a DESeqDataSet (SummarizedExperiment) with more th…
Comment: Suggested package missing from Development version of Bioconductor
by
shepherl
3.5k
Have you tried reaching out to the maintainers? If they do not fix the package it will remain unavailable and cause ERROR in your package.…
Votes
DESeq2 analysis with only two replicates
Comment: Batch correction and repeated measures
batch effect : comBat or blocking in limma ?
Batch correction and repeated measures
Comment: Does countsFromAbundance="lengthScaledTPM" produce un-normalized counts?
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