Bioconductor RUVNormalize

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 6.8 years ago by davide risso ▴ 950 • written 6.8 years ago by Nik Tuzov ▴ 80

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normalization ruvseq ruvnormalize ruvs eda

8.1 years ago thomas.wolfe • 0

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RUVnormalize R edgeR RUVSeq RUVnormalizeData

23 months ago • updated 22 months ago Mohamed ▴ 30

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2.3k

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RUV ruvseq ruvr ruvnormalize single cell

6.8 years ago Nik Tuzov ▴ 80

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RUVnormalize limma corrected expression matrix microarray

updated 6.3 years ago by Dario Strbenac ★ 1.5k • written 6.3 years ago by massimo.acquaviva.78 • 0

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869

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DESeq2 NanoStringNCTools RUVnormalize RUVSeq DifferentialExpression

13 months ago AZ ▴ 30

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1.2k

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RUVNormalize Subsetting

updated 8.9 years ago by laurent.jacob ▴ 10 • written 9.0 years ago by Dario Strbenac ★ 1.5k

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625

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RUVnormalize protein mi

5.6 years ago losik • 0

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1.3k

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ruvnormalize microarray normalization

updated 8.9 years ago by laurent.jacob ▴ 10 • written 8.9 years ago by Cornwell, Adam ▴ 110

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1.3k

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edger ruvseq rnaseq normalization ruvnormalize

updated 6.9 years ago by davide risso ▴ 950 • written 6.9 years ago by manish20072013 • 0

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ruvseq RUV ruvnormalize ruvg

7.8 years ago anthonycolombo60 • 0

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rnaseq ruvnormalize normalization technical replicates

8.4 years ago thomas.wolfe • 0

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RUVSeq RUVnormalize

16 hours ago Ειρήνη • 0

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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