Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Subsetting
•
reset
1
vote
2
replies
588
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
7 months ago • updated 6 months ago
Duy Duc
• 0
0
votes
5
replies
1.2k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
23 months ago
rtrivedi1
▴ 10
0
votes
2
replies
868
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 4.4 years ago by
Hervé Pagès
16k • written 4.4 years ago by
felix.ernst
• 0
4
votes
7
replies
3.1k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 4.4 years ago by
Aaron Lun
★ 28k • written 4.4 years ago by
TJ
• 0
1
vote
1
reply
659
views
Subsetting GRanges objext
GRanges
subsetting
updated 4.8 years ago by
James W. MacDonald
63k • written 4.8 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
1.4k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.0 years ago by
Michael Love
40k • written 5.0 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
989
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 5.6 years ago by
Axel Klenk
▴ 990 • written 5.6 years ago by
A
▴ 40
3
votes
4
replies
4.8k
views
Subset GRanges object into new object
R
genomicranges
subsetting
5.6 years ago
jhanks1981
• 0
4
votes
3
replies
3.0k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
5.7 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.6k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 6.1 years ago by
Hervé Pagès
16k • written 6.1 years ago by
bri.isabella
• 0
0
votes
1
reply
977
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 6.3 years ago by
henrik.seidel
▴ 40 • written 6.5 years ago by
Guido Hooiveld
★ 3.6k
0
votes
0
replies
705
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 6.4 years ago by
Martin Morgan
25k • written 6.4 years ago by
smajor
• 0
1
vote
2
replies
775
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
6.7 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
1.7k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 6.8 years ago by
Michael Lawrence
11k • written 6.8 years ago by
mdeea123
▴ 10
3
votes
7
replies
5.7k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 6.9 years ago by
Gordon Smyth
47k • written 6.9 years ago by
mnaymik
▴ 10
4
votes
4
replies
1.3k
views
Limma Elist subsetting
microarray
limma
subsetting
7.0 years ago
arfranco
▴ 130
4
votes
2
replies
1.2k
views
drop levels in eSet pData
subsetting
eSet
7.2 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.1k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 7.7 years ago by
Jiang, Mike
★ 1.3k • written 7.7 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.1k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 7.8 years ago by
James W. MacDonald
63k • written 7.8 years ago by
arado1
• 0
2
votes
1
reply
1.0k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 7.9 years ago by
laurent.jacob
▴ 10 • written 8.0 years ago by
Dario Strbenac
★ 1.5k
20 results • Page
1 of 1
Recent ...
Replies
Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat
by
Gordon Smyth
47k
limma already adjusts for the baseline expression level of each subject. Trying to include baseline expression explicitly in the linear mod…
Comment: Remove duplicate genera in DEseq output?
by
ATpoint
★ 2.9k
This seems to be very specific rather than a general and technical DESeq2 question. See the last point of https://support.bioconductor.org/…
Comment: Use with_go along with other filters in getBM function
by
RuBBiT0
▴ 10
Hi @mike-smith , you are correct. I was trying to select the ones that have some GO annotations by using the `with_go` filter. I was confus…
Answer: Can VST-transformed community composition data be expressed as relative abundanc
by
Michael Love
40k
The point of the VST is to make the data systematically homoskedastic (that is, not systematic trend of variance over mean, but not e.g. fo…
Comment: How to update a package at Bioconductor
by
ma79
• 0
thanks, just informed the original maintainer to send an email.
Votes
A: Using R package 'limma' on pre-normalized counts and the effect of non-equivalen
Using R package 'limma' on pre-normalized counts and the effect of non-equivalent reads/sample on limma linear model
A: What can I do if I only have TPM but not raw counts data?
What can I do if I only have TPM but not raw counts data?
Differential expression of FPKM from RNA-seq data using limma and voom()
Awards
• All
Teacher
to
deeenes
▴ 30
Popular Question
to
Hervé Pagès
16k
Popular Question
to
Gordon Smyth
47k
Teacher
to
James W. MacDonald
63k
Popular Question
to
Laurent Gatto
1.6k
Locations
• All
WEHI, Melbourne, Australia,
1 minute ago
United States,
2 minutes ago
United States,
6 minutes ago
United States,
1 hour ago
Sweden,
1 hour ago
Traffic: 240 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6