Showing : RankProd • reset
0
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Shifted volcano plot after RankProd
rankp RankProd
2.5 years ago Alessia • 0
1
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3
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1.5k
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How can I run a paired RankProd analysis in R?
RankProd paired RNAseq R
updated 6.0 years ago by 68k • written 6.0 years ago by • 0
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RankProd RP function length error
rankprod rp gr2
updated 7.2 years ago by 43k • written 7.2 years ago by • 0
3
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2
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1.5k
views
RankProd throws "is.infinite(data)" error for type "S4" for differential expression analysis
rankprod limma affy bioconductor microarray
updated 8.3 years ago by 68k • written 8.3 years ago by ▴ 20
0
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7
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2.1k
views
RankProd crashing - stability issues?
rankprod crash
8.3 years ago bhgyu ▴ 30
4
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6
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3.1k
views
Bioconductor open source policy
licenses rankprod
updated 8.3 years ago by 68k • written 8.3 years ago by • 0
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1.2k
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Dual channel microarray statistics - Rankproducts did not calculate average FC in log scale.
Dual channel microarray Rankprod
8.7 years ago ggyu1215 • 0
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1.1k
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How does specifying an origin increase the power when using RPadvance?
rankprod microarray bioconductor
9.3 years ago johnanthonyholtjr • 0
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1.2k
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Regarding the package RankProd
microarray rankprod
9.5 years ago sancharisircar24 • 0
1
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1
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1.3k
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Problem using RankProd
rankprod
updated 10.0 years ago by 68k • written 10.0 years ago by • 0
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1.5k
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RankProd: simultaneously up and down regulated gene
RankProd differential gene expression
10.1 years ago horcsct ▴ 10
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1.4k
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Combine RankProd output Tables (up & down)
RankProd
10.1 years ago horcsct ▴ 10
0
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0
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2.3k
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Error while running RankProd RPadvance from 2 origins - invalid 'row.names' length
rankprod microarray
10.3 years ago sumedharoy • 0
5
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2
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2.8k
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RankProd: Why are p-values=0?
rankprod p-value
updated 10.3 years ago by 68k • written 10.3 years ago by • 0
0
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0
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1.4k
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Possible implementation of two class paired Rank Products in r with package RankProd
RankProd pairedtest bioconductor biologicalreplicates
10.5 years ago svlachavas ▴ 840
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1.2k
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Can Rank-production be applied to test the condition's effects on treatments?
RankProd RankProd
11.2 years ago Guest User ★ 13k
0
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1
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1.7k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
Normalization probe limma RankProd Normalization probe limma RankProd
updated 11.4 years ago by ▴ 30 • written 11.4 years ago by 53k
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1
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2.0k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
cdf RankProd cdf RankProd
updated 11.4 years ago by ▴ 30 • written 11.4 years ago by ▴ 190
0
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0
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1.1k
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
RankProd RankProd
11.5 years ago Stefanie Busch ▴ 30
0
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3
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2.6k
views
GEOquerry and virtualArray
RankProd virtualArray RankProd virtualArray
updated 11.5 years ago by 68k • written 11.5 years ago by ▴ 30
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1.5k
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Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
12.1 years ago Guest User ★ 13k
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0
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1.2k
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Comparing human and mouse expression directly with RankProd
RankProd RankProd
12.7 years ago Cornwell, Adam ▴ 110
0
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0
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1.3k
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RankProd absurd results
qPCR RankProd qPCR RankProd
12.8 years ago Guest User ★ 13k
0
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0
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1.3k
views
RankProd analysis for Agilent Single Color array ??
limma RankProd limma RankProd
12.9 years ago Guest User ★ 13k
0
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0
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1.3k
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RankProd paired-sample analysis
RankProd RankProd
13.2 years ago Maider Muñoz ▴ 20
0
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0
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1.2k
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RankProd package paired-sample sesign
RankProd RankProd
13.2 years ago Maider Muñoz ▴ 20
0
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1
reply
1.4k
views
meta-analysis with RankProd
RankProd RankProd
updated 13.6 years ago by ▴ 740 • written 13.7 years ago by ▴ 40
0
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1
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1.6k
views
Help needed with topGene function of RankProd package
RankProd RankProd
updated 14.1 years ago by ★ 13k • written 14.1 years ago by ▴ 30
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2
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1.9k
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Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
14.2 years ago boczniak767 ▴ 740
0
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0
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1.0k
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Gene IDs returned by RankProd topGene command
RankProd RankProd
15.6 years ago Blumenberg, Miroslav ▴ 30
0
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2
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1.7k
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Query related to topGene functionality in RankProd library.
Cancer probe RankProd Cancer probe RankProd
updated 15.8 years ago by ▴ 20 • written 15.8 years ago by ▴ 20
0
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0
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1.4k
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Query related to topGene functionality in RankProd library.
probe RankProd probe RankProd
15.8 years ago Rohan M ▴ 20
0
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1
reply
1.2k
views
Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 16.0 years ago by 21k • written 16.0 years ago by ▴ 10
0
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4
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1.9k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
Annotation cdf limma RankProd Annotation cdf limma RankProd
updated 16.7 years ago by ▴ 70 • written 16.7 years ago by ▴ 190
0
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2
replies
1.7k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
cdf limma RankProd cdf limma RankProd
updated 16.7 years ago by 68k • written 16.7 years ago by ▴ 70
0
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0
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1.2k
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Rank Products- breast cancer
Cancer RankProd Cancer RankProd
17.4 years ago Eleni Christodoulou ▴ 150
0
votes
3
replies
2.2k
views
Error in RankProd package
limma RankProd limma RankProd
updated 18.6 years ago by ▴ 100 • written 18.6 years ago by ▴ 680
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0
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1.2k
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meaning of pfp in RankProd
RankProd RankProd
18.7 years ago Matthew McCormack ▴ 180
0
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0
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1.3k
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help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
18.9 years ago Kimpel, Mark W ▴ 890
0
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3
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1.7k
views
Wilcoxon test [was loged data or not loged previous to use normalize.quantile]
Microarray limma RankProd Microarray limma RankProd
updated 20.5 years ago by ▴ 340 • written 20.5 years ago by 53k
0
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0
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1.1k
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A new package: RankProd
RankProd RankProd
20.5 years ago Fangxin Hong ▴ 810
41 results • Page 1 of 1
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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