Showing : rankprod • reset
0
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Shifted volcano plot after RankProd
rankp RankProd
7 months ago Alessia • 0
1
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3
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888
views
How can I run a paired RankProd analysis in R?
RankProd paired RNAseq R
updated 4.1 years ago by 64k • written 4.1 years ago by • 0
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0
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708
views
RankProd RP function length error
rankprod rp gr2
updated 5.4 years ago by 41k • written 5.4 years ago by • 0
3
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2
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1.0k
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RankProd throws "is.infinite(data)" error for type "S4" for differential expression analysis
rankprod limma affy bioconductor microarray
updated 6.4 years ago by 64k • written 6.4 years ago by ▴ 20
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7
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1.4k
views
RankProd crashing - stability issues?
rankprod crash
6.5 years ago bhgyu ▴ 30
4
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6
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2.1k
views
Bioconductor open source policy
licenses rankprod
updated 6.5 years ago by 64k • written 6.5 years ago by • 0
0
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0
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810
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Dual channel microarray statistics - Rankproducts did not calculate average FC in log scale.
Dual channel microarray Rankprod
6.8 years ago ggyu1215 • 0
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0
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770
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How does specifying an origin increase the power when using RPadvance?
rankprod microarray bioconductor
7.4 years ago johnanthonyholtjr • 0
0
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0
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902
views
Regarding the package RankProd
microarray rankprod
7.7 years ago sancharisircar24 • 0
1
vote
1
reply
910
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Problem using RankProd
rankprod
updated 8.2 years ago by 64k • written 8.2 years ago by • 0
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0
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1.2k
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RankProd: simultaneously up and down regulated gene
RankProd differential gene expression
8.2 years ago horcsct ▴ 10
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0
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1.0k
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Combine RankProd output Tables (up & down)
RankProd
8.2 years ago horcsct ▴ 10
0
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0
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1.9k
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Error while running RankProd RPadvance from 2 origins - invalid 'row.names' length
rankprod microarray
8.4 years ago sumedharoy • 0
5
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2
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2.2k
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RankProd: Why are p-values=0?
rankprod p-value
updated 8.4 years ago by 64k • written 8.4 years ago by • 0
0
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0
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1.1k
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Possible implementation of two class paired Rank Products in r with package RankProd
RankProd pairedtest bioconductor biologicalreplicates
8.6 years ago svlachavas ▴ 820
0
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0
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795
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Can Rank-production be applied to test the condition's effects on treatments?
RankProd RankProd
9.4 years ago Guest User ★ 12k
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1
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1.3k
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
Normalization probe limma RankProd Normalization probe limma RankProd
updated 9.6 years ago by ▴ 30 • written 9.6 years ago by 48k
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1
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1.5k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
cdf RankProd cdf RankProd
updated 9.6 years ago by ▴ 30 • written 9.6 years ago by ▴ 190
0
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0
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806
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
RankProd RankProd
9.6 years ago Stefanie Busch ▴ 30
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3
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2.1k
views
GEOquerry and virtualArray
RankProd virtualArray RankProd virtualArray
updated 9.7 years ago by 64k • written 9.7 years ago by ▴ 30
0
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0
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1.1k
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Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
10.3 years ago Guest User ★ 12k
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0
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885
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Comparing human and mouse expression directly with RankProd
RankProd RankProd
10.9 years ago Cornwell, Adam ▴ 110
0
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0
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974
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RankProd absurd results
qPCR RankProd qPCR RankProd
11.0 years ago Guest User ★ 12k
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0
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981
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RankProd analysis for Agilent Single Color array ??
limma RankProd limma RankProd
11.1 years ago Guest User ★ 12k
0
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0
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992
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RankProd paired-sample analysis
RankProd RankProd
11.3 years ago Maider Muñoz ▴ 20
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0
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925
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RankProd package paired-sample sesign
RankProd RankProd
11.3 years ago Maider Muñoz ▴ 20
0
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1
reply
989
views
meta-analysis with RankProd
RankProd RankProd
updated 11.8 years ago by ▴ 720 • written 11.8 years ago by ▴ 40
0
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1
reply
1.2k
views
Help needed with topGene function of RankProd package
RankProd RankProd
updated 12.2 years ago by 13k • written 12.2 years ago by ▴ 30
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2
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1.4k
views
Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
12.3 years ago boczniak767 ▴ 720
0
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0
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770
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Gene IDs returned by RankProd topGene command
RankProd RankProd
13.7 years ago Blumenberg, Miroslav ▴ 30
0
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2
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1.3k
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Query related to topGene functionality in RankProd library.
Cancer probe RankProd Cancer probe RankProd
updated 14.0 years ago by ▴ 20 • written 14.0 years ago by ▴ 20
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0
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1.1k
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Query related to topGene functionality in RankProd library.
probe RankProd probe RankProd
14.0 years ago Rohan M ▴ 20
0
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1
reply
903
views
Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 14.2 years ago by 21k • written 14.2 years ago by ▴ 10
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4
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1.3k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
Annotation cdf limma RankProd Annotation cdf limma RankProd
updated 14.9 years ago by ▴ 70 • written 14.9 years ago by ▴ 190
0
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2
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1.3k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
cdf limma RankProd cdf limma RankProd
updated 14.9 years ago by 64k • written 14.9 years ago by ▴ 70
0
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0
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874
views
Rank Products- breast cancer
Cancer RankProd Cancer RankProd
15.5 years ago Eleni Christodoulou ▴ 150
0
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3
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1.7k
views
Error in RankProd package
limma RankProd limma RankProd
updated 16.7 years ago by ▴ 100 • written 16.7 years ago by ▴ 680
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0
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828
views
meaning of pfp in RankProd
RankProd RankProd
16.8 years ago Matthew McCormack ▴ 180
0
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0
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931
views
help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
17.1 years ago Kimpel, Mark W ▴ 890
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3
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1.2k
views
Wilcoxon test [was loged data or not loged previous to use normalize.quantile]
Microarray limma RankProd Microarray limma RankProd
updated 18.7 years ago by ▴ 340 • written 18.7 years ago by 48k
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0
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789
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A new package: RankProd
RankProd RankProd
18.7 years ago Fangxin Hong ▴ 810
41 results • Page 1 of 1
Recent ...
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Answer: Obtaining rsIDs with ENSG and variant ID information by Robert Castelo ★ 3.0k
You should first and foremost find out what was the human reference genome version from which your dataset was derived. Assuming this was G…
Comment: DESeq2 - groups with biological replicates from the same patient by James W. MacDonald 64k
If by clustering you mean there might be a within-subject correlation, then yes it's a possibility. But you cannot control for that using a…
Comment: Why is DMRcate not available for Bioconductor version 3.18? by Mike Smith ★ 6.2k
If we hover over the tiny little red icon next to the Linux build report, we can see that the source package isn't being distributed becaus…
Comment: ClusterProfiler - enrichKEGG on specific pathways by EvaLan • 0
Hey bekah, I wonder if you have found the solution to solve this issue? Best wishes, EvaLan
Comment: Why is DMRcate not available for Bioconductor version 3.18? by Gordon Smyth 48k
That's a good question. On the DMRcate landing page, one can see that the "Source package" file is missing, meaning that installation in Un…
Votes
Comment: limma::voom vs edgeR::voomLmFit - when to use?
Answer: limma::voom vs edgeR::voomLmFit - when to use?
Answer: trying to add SingleR label to Seurat Object fails
Comment: DESeq2 - groups with biological replicates from the same patient
Answer: EdgeR: Exact test and glmQLFTest produce very different results
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