Showing : RankProd • reset
5
votes
2
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2.3k
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RankProd: Why are p-values=0?
rankprod p-value
updated 8.9 years ago by 65k • written 8.9 years ago by • 0
4
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6
replies
2.3k
views
Bioconductor open source policy
licenses rankprod
updated 6.9 years ago by 65k • written 6.9 years ago by • 0
3
votes
2
replies
1.2k
views
RankProd throws "is.infinite(data)" error for type "S4" for differential expression analysis
rankprod limma affy bioconductor microarray
updated 6.8 years ago by 65k • written 6.8 years ago by ▴ 20
1
vote
1
reply
994
views
Problem using RankProd
rankprod
updated 8.6 years ago by 65k • written 8.6 years ago by • 0
1
vote
3
replies
1.0k
views
How can I run a paired RankProd analysis in R?
RankProd paired RNAseq R
updated 4.5 years ago by 65k • written 4.5 years ago by • 0
0
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0
replies
967
views
Rank Products- breast cancer
Cancer RankProd Cancer RankProd
16.0 years ago Eleni Christodoulou ▴ 150
0
votes
2
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1.4k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
cdf limma RankProd cdf limma RankProd
updated 15.3 years ago by 65k • written 15.3 years ago by ▴ 70
0
votes
4
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1.5k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
Annotation cdf limma RankProd Annotation cdf limma RankProd
updated 15.3 years ago by ▴ 70 • written 15.3 years ago by ▴ 190
0
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0
replies
854
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Gene IDs returned by RankProd topGene command
RankProd RankProd
14.1 years ago Blumenberg, Miroslav ▴ 30
0
votes
1
reply
983
views
Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 14.6 years ago by 21k • written 14.6 years ago by ▴ 10
0
votes
0
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1.2k
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Query related to topGene functionality in RankProd library.
probe RankProd probe RankProd
14.4 years ago Rohan M ▴ 20
0
votes
2
replies
1.4k
views
Query related to topGene functionality in RankProd library.
Cancer probe RankProd Cancer probe RankProd
updated 14.4 years ago by ▴ 20 • written 14.4 years ago by ▴ 20
0
votes
1
reply
1.3k
views
Help needed with topGene function of RankProd package
RankProd RankProd
updated 12.7 years ago by ★ 13k • written 12.7 years ago by ▴ 30
0
votes
2
replies
1.5k
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Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
12.8 years ago boczniak767 ▴ 720
0
votes
1
reply
1.1k
views
meta-analysis with RankProd
RankProd RankProd
updated 12.2 years ago by ▴ 720 • written 12.2 years ago by ▴ 40
0
votes
0
replies
993
views
RankProd package paired-sample sesign
RankProd RankProd
11.8 years ago Maider Muñoz ▴ 20
0
votes
0
replies
1.1k
views
RankProd paired-sample analysis
RankProd RankProd
11.8 years ago Maider Muñoz ▴ 20
0
votes
0
replies
1.1k
views
RankProd analysis for Agilent Single Color array ??
limma RankProd limma RankProd
11.5 years ago Guest User ★ 13k
0
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0
replies
1.1k
views
RankProd absurd results
qPCR RankProd qPCR RankProd
11.4 years ago Guest User ★ 13k
0
votes
0
replies
966
views
Comparing human and mouse expression directly with RankProd
RankProd RankProd
11.3 years ago Cornwell, Adam ▴ 110
0
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0
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1.2k
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Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
10.7 years ago Guest User ★ 13k
0
votes
3
replies
2.3k
views
GEOquerry and virtualArray
RankProd virtualArray RankProd virtualArray
updated 10.1 years ago by 65k • written 10.1 years ago by ▴ 30
0
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0
replies
877
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
RankProd RankProd
10.0 years ago Stefanie Busch ▴ 30
0
votes
1
reply
1.7k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
cdf RankProd cdf RankProd
updated 10.0 years ago by ▴ 30 • written 10.0 years ago by ▴ 190
0
votes
1
reply
1.4k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
Normalization probe limma RankProd Normalization probe limma RankProd
updated 10.0 years ago by ▴ 30 • written 10.0 years ago by 50k
0
votes
0
replies
908
views
Can Rank-production be applied to test the condition's effects on treatments?
RankProd RankProd
9.8 years ago Guest User ★ 13k
0
votes
0
replies
1.2k
views
Possible implementation of two class paired Rank Products in r with package RankProd
RankProd pairedtest bioconductor biologicalreplicates
9.1 years ago svlachavas ▴ 830
0
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0
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2.1k
views
Error while running RankProd RPadvance from 2 origins - invalid 'row.names' length
rankprod microarray
8.9 years ago sumedharoy • 0
0
votes
0
replies
1.1k
views
Combine RankProd output Tables (up & down)
RankProd
8.7 years ago horcsct ▴ 10
0
votes
0
replies
1.3k
views
RankProd: simultaneously up and down regulated gene
RankProd differential gene expression
8.7 years ago horcsct ▴ 10
0
votes
0
replies
962
views
Regarding the package RankProd
microarray rankprod
8.1 years ago sancharisircar24 • 0
0
votes
0
replies
841
views
How does specifying an origin increase the power when using RPadvance?
rankprod microarray bioconductor
7.9 years ago johnanthonyholtjr • 0
0
votes
0
replies
918
views
Dual channel microarray statistics - Rankproducts did not calculate average FC in log scale.
Dual channel microarray Rankprod
7.3 years ago ggyu1215 • 0
0
votes
7
replies
1.6k
views
RankProd crashing - stability issues?
rankprod crash
6.9 years ago bhgyu ▴ 30
0
votes
0
replies
811
views
RankProd RP function length error
rankprod rp gr2
updated 5.8 years ago by 42k • written 5.8 years ago by • 0
0
votes
0
replies
877
views
A new package: RankProd
RankProd RankProd
19.1 years ago Fangxin Hong ▴ 810
0
votes
0
replies
382
views
Shifted volcano plot after RankProd
rankp RankProd
12 months ago Alessia • 0
0
votes
3
replies
1.4k
views
Wilcoxon test [was loged data or not loged previous to use normalize.quantile]
Microarray limma RankProd Microarray limma RankProd
updated 19.1 years ago by ▴ 340 • written 19.1 years ago by 50k
0
votes
0
replies
1.0k
views
help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
17.5 years ago Kimpel, Mark W ▴ 890
0
votes
0
replies
927
views
meaning of pfp in RankProd
RankProd RankProd
17.3 years ago Matthew McCormack ▴ 180
0
votes
3
replies
1.8k
views
Error in RankProd package
limma RankProd limma RankProd
updated 17.1 years ago by ▴ 100 • written 17.1 years ago by ▴ 680
41 results • Page 1 of 1
Recent ...
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Answer: Can I trust the differential expression analysis when the two groups overlap on by Michael Love 42k
Can you use `vst` instead of `rlog` and increase to 1000 or 2000 genes? I'm wondering if there's a way to characterize these 7 samples. …
Comment: Can I trust the differential expression analysis when the two groups overlap on by BioinfGuru ▴ 30
I think I am about to run into the same issue with my data, so I'll be interested to read peoples opinions on this also i.e. when the group…
Answer: How to approach time course RNAseq data? Seeing 80% DE genes in timepoint groups by Gordon Smyth 50k
The MDS plot shows that the time points are hugely different and whereas the replicate samples appear very consistent, with very low variat…
Answer: Store output of matchPWM() by mat149 ▴ 70
hitlist<-lapply(irs, FUN = matchPWM, min.score="90%", with.score=TRUE, pwm = pwm) ot <- endoapply(hitlist, function(x) as(x, "IRanges")) …
Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by alex.pico ▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Votes
Comment: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
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