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Release
•
reset
1
vote
8
replies
1.5k
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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.8k
0
votes
7
replies
681
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
8 weeks ago • updated 8 days ago
shepherl
3.8k
1
vote
4
replies
549
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 5 months ago by
Michael Love
41k • written 5 months ago by
Nadine
▴ 60
0
votes
4
replies
721
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 6 months ago by
Guido Hooiveld
★ 3.9k • written 6 months ago by
shepherl
3.8k
0
votes
2
replies
1.1k
views
News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 6.1 years ago by
shepherl
3.8k
5
votes
1
reply
434
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.8k
0
votes
1
reply
256
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
8 weeks ago • updated 5 weeks ago
shepherl
3.8k
0
votes
1
reply
214
views
Rcpp compilation error
Release
Rcpp
updated 7 weeks ago by
ATpoint
★ 4.1k • written 7 weeks ago by
Robert K. Bradley
▴ 40
1
vote
0
replies
22
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
10 hours ago
shepherl
3.8k
1
vote
0
replies
390
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
417
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
7 months ago
shepherl
3.8k
0
votes
0
replies
81
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
19 days ago
shepherl
3.8k
0
votes
0
replies
218
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.8k
13 results • Page
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Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Votes
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
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tangming2005
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