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experimentData
•
reset
0
votes
11
replies
3.0k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
2.0 years ago • updated 16 months ago
shepherl
4.3k
1
vote
8
replies
2.2k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 7.0 years ago by
shepherl
4.3k
1
vote
1
reply
1.5k
views
Confused about design for RNA seq experiment
RNAseq
ExperimentData
RNAseq123
RNA
ExperimentalDesign
updated 3.5 years ago by
ATpoint
★ 5.0k • written 3.5 years ago by
Mohamed
▴ 30
0
votes
5
replies
2.1k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
4.4 years ago • updated 3.9 years ago
shepherl
4.3k
2
votes
2
replies
2.1k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
5.3 years ago • updated 4.8 years ago
shepherl
4.3k
1
vote
2
replies
2.0k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
5.4 years ago
shepherl
4.3k
0
votes
0
replies
1.4k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.0 years ago
shepherl
4.3k
0
votes
1
reply
1.4k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.2 years ago
shepherl
4.3k
0
votes
0
replies
1.3k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.3 years ago
shepherl
4.3k
0
votes
2
replies
2.7k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
6.4 years ago • updated 6.3 years ago
shepherl
4.3k
0
votes
0
replies
1.5k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
6.5 years ago • updated 6.4 years ago
shepherl
4.3k
0
votes
1
reply
1.5k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
6.6 years ago • updated 6.5 years ago
shepherl
4.3k
0
votes
3
replies
1.7k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
6.8 years ago
shepherl
4.3k
0
votes
1
reply
1.4k
views
News:
Initial List of Deprecated Packages Bioc 3.10
software
experimentdata
release
deprecation
annotation
News
6.8 years ago
shepherl
4.3k
0
votes
1
reply
1.7k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
7.0 years ago
shepherl
4.3k
0
votes
0
replies
1.6k
views
News:
DEADLINE: All packages to pass R CMD build and R CMD check
release
software
experimentdata
workflows
News
7.9 years ago
shepherl
4.3k
0
votes
0
replies
1.6k
views
How to load additional data from fcs files
fcs
concentration
experimentdata
8.9 years ago
jurg.spaak
• 0
0
votes
1
reply
2.2k
views
Extract the gate in the data file (fcs file) from MoFlo Astrios
gate
cytometry
experimentdata
stategy
MoFlo Astrios
9.1 years ago
cr
• 0
1
vote
2
replies
1.6k
views
Submitting an experimental data package
submit package
experimentdata
updated 10.0 years ago by
Martin Morgan
25k • written 10.0 years ago by
mark.dunning
▴ 20
1
vote
3
replies
2.1k
views
How to update the data in an experimental data package
experimentdata
update
updated 11.4 years ago by
Laurent Gatto
1.6k • written 11.4 years ago by
paul.theodor.pyl
▴ 10
0
votes
2
replies
3.7k
views
Biobase - Error: ExpressionSet
Microarray
Annotation
GO
ExperimentData
Biobase
Microarray
Annotation
GO
ExperimentData
updated 12.4 years ago by
Laurent Gatto
1.6k • written 12.4 years ago by
Lisa Cohen
▴ 50
0
votes
4
replies
10k
views
Error while building ExpressionSet from scratch....
ExperimentData
LMGene
ExperimentData
LMGene
updated 14.3 years ago by
Martin Morgan
25k • written 14.3 years ago by
Bas Jansen
▴ 150
0
votes
1
reply
1.8k
views
justRMA {affy} error
Annotation
ExperimentData
cdf
Annotation
ExperimentData
cdf
updated 14.5 years ago by
Martin Morgan
25k • written 14.5 years ago by
Julio Alejandro Di Rienzo
▴ 10
0
votes
2
replies
2.6k
views
RMA implemented in oligo package vs affy package
ExperimentData
cdf
affy
PROcess
oligo
ExperimentData
cdf
affy
PROcess
oligo
16.9 years ago
heyi xiao
▴ 360
0
votes
0
replies
1.7k
views
Beadarray error: comparison of types not implemented
Annotation
ExperimentData
beadarray
Annotation
ExperimentData
beadarray
16.9 years ago
Anne-Kristin Stavrum
▴ 10
0
votes
0
replies
1.8k
views
Beadarray error: comparison of types not implemented
Annotation
ExperimentData
Cancer
Biobase
beadarray
Annotation
ExperimentData
Cancer
16.9 years ago
Martin Morgan
25k
0
votes
3
replies
2.2k
views
ExpressionSet or MAList
Annotation
ExperimentData
Cancer
Annotation
ExperimentData
Cancer
updated 17.8 years ago by
Gordon Smyth
53k • written 17.9 years ago by
Daniel Brewer
★ 1.9k
0
votes
2
replies
2.0k
views
ReadAffy fails 64bit linux Error in .nextMethod(e1, e2) :
Annotation
ExperimentData
cdf
affy
Annotation
ExperimentData
cdf
affy
updated 17.9 years ago by
James W. MacDonald
68k • written 17.9 years ago by
Langdon W B
▴ 20
0
votes
3
replies
2.7k
views
ReadAffy Error
Annotation
ExperimentData
cdf
affy
affyio
Annotation
ExperimentData
cdf
affy
affyio
updated 18.5 years ago by
Sylvia.Merk@ukmuenster.de
▴ 60 • written 18.5 years ago by
Markus Schmidberger
▴ 380
0
votes
6
replies
4.2k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
updated 18.6 years ago by
Weiyin Zhou
▴ 220 • written 18.6 years ago by
Jenny Drnevich
★ 2.2k
0
votes
0
replies
2.3k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
18.6 years ago
Min Wook Kim
▴ 20
31 results • Page
1 of 1
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Comment: Inclusion of non-coding portions of transcripts (UTR-regions and introns) within
by
Pat
• 0
Ill be honest, I didnt trust any of these services for a long time. Im a political science major and the pressure around writing is intense…
Comment: Question on processing compound protein groups in limpa
by
brianpeterson1210
• 0
Thank you[,][1] Appreciated! [1]: http://paint3d.org
Comment: Subsetting DDS object for individual conditions over time
by
A
▴ 60
Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…
Answer: Subsetting DDS object for individual conditions over time
by
ATpoint
★ 5.0k
It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…
Comment: GSEA error
by
Adithi
• 0
Thank you so much. That makes perfect sense to me. I will work on this.
Votes
Comment: Question about using LRT test for time course experiments with DESeq2
A: DESeq2 LRT test for multi-factor designs
Answer: RNA Seq using Lrt
Answer: DESeq2 LRT Reduced Formula
Answer: DESeq2: LRT or WALD guidance
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