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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.9k
0
votes
2
replies
1.1k
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News:
Final List of Deprecated Packages for Bioc3.7
deprecate
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release
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written 6.1 years ago by
shepherl
3.9k
0
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4
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News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 6 months ago by
Guido Hooiveld
★ 3.9k • written 6 months ago by
shepherl
3.9k
0
votes
7
replies
711
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
9 weeks ago • updated 14 days ago
shepherl
3.9k
1
vote
4
replies
557
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 6 months ago by
Michael Love
42k • written 6 months ago by
Nadine
▴ 60
5
votes
1
reply
443
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.9k
0
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0
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427
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News:
Bioconductor 3.18 Release Schedule
Release
Software
release
8 months ago
shepherl
3.9k
1
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0
replies
408
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
0
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1
reply
271
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News:
Bioconductor 3.19 Release Schedule
Release
release
Software
9 weeks ago • updated 6 weeks ago
shepherl
3.9k
0
votes
0
replies
238
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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.9k
0
votes
1
reply
224
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Rcpp compilation error
Release
Rcpp
updated 8 weeks ago by
ATpoint
★ 4.1k • written 8 weeks ago by
Robert K. Bradley
▴ 40
0
votes
0
replies
86
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
25 days ago
shepherl
3.9k
3
votes
0
replies
83
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News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
6 days ago
shepherl
3.9k
13 results • Page
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Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
angelathuynh5
• 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Limma without eBayes, is it indistunguishable from Ordinary Least Square?
by
Gordon Smyth
50k
The formula given in the original question is correct and yours is not. Your formula isn't even constrained to be between 0 and 1. Here is …
Comment: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Answer: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…
Votes
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
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