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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
13 months ago Maria Doyle ▴ 100
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News: Bioconductor Carpentries instructor training
teaching Carpentries
3.0 years ago Maria Doyle ▴ 100
13
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3
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3.1k
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News: Bioconductor teaching week
teaching Carpentries
written 3.2 years ago by 1.6k
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Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
3.3 years ago Andy Lynch ▴ 120
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Job: Bioconductor Community Manager
Community Teaching Bioconductor
3.5 years ago • updated 3.4 years ago Matthew Ritchie ▴ 1000
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Job: Research software engineer at the de Duve Institute, UCLouvain (Brussels, Belgium)
software engineer job teaching bioconductor Job
7.1 years ago Laurent Gatto 1.6k
8
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12
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EdgeR: Explaning dispersion types to newbies
edger dispersion estimatedispersions visualization teaching
updated 7.4 years ago by ★ 29k • written 7.4 years ago by ▴ 20
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News: New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology bioinformatics teaching master News
updated 9.3 years ago by • 0 • written 9.4 years ago by ▴ 10
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 9.6 years ago by ▴ 10 • written 9.6 years ago by ★ 13k
9 results • Page 1 of 1
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Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
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Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
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