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News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
14 months ago
Maria Doyle
▴ 110
0
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0
replies
981
views
News:
Bioconductor Carpentries instructor training
teaching
Carpentries
3.1 years ago
Maria Doyle
▴ 110
13
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3
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3.2k
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News:
Bioconductor teaching week
teaching
Carpentries
written 3.3 years ago by
Laurent Gatto
1.6k
1
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0
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1.2k
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Job:
Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational
teaching
statistics
research
3.3 years ago
Andy Lynch
▴ 120
0
votes
0
replies
1.4k
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Job:
Bioconductor Community Manager
Community
Teaching
Bioconductor
3.5 years ago
Matthew Ritchie
▴ 1000
0
votes
0
replies
1.8k
views
Job:
Research software engineer at the de Duve Institute, UCLouvain (Brussels, Belgium)
software engineer
job
teaching
bioconductor
Job
7.1 years ago
Laurent Gatto
1.6k
8
votes
12
replies
13k
views
EdgeR: Explaning dispersion types to newbies
edger
dispersion
estimatedispersions
visualization
teaching
updated 7.4 years ago by
Aaron Lun
★ 29k • written 7.4 years ago by
Mr.RB
▴ 20
1
vote
1
reply
2.4k
views
News:
New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology
bioinformatics
teaching
master
News
updated 9.4 years ago by
Chloe2013025
• 0 • written 9.5 years ago by
enridomenici
▴ 10
5
votes
1
reply
4.0k
views
News:
Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication
workflows
benchmark
teaching
News
updated 9.7 years ago by
thomas.ingraham
▴ 10 • written 9.7 years ago by
Wolfgang Huber
★ 13k
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Comment: Question about DESeq2 Design for Paired Treatment Study
by
ATpoint
★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR
by
efoss
▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma
by
Gordon Smyth
53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR
by
JKim
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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