Bioconductor TxDB.Hsapiens.UCSC.hg38.knownGene

Showing : TxDB.Hsapiens.UCSC.hg38.knownGene • reset

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annotation txdb.hsapiens.ucsc.hg38.knowngene bug

7.6 years ago shilin.zhao ▴ 40

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txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db

updated 6.4 years ago by Simon Anders ★ 3.7k • written 6.4 years ago by Mark Dunning ★ 1.1k

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3.5k

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txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation

8.1 years ago enricoferrero ▴ 660

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1.5k

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MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation

14 months ago davidhillis • 0

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1.4k

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 2.4 years ago by Hervé Pagès 16k • written 2.4 years ago by BioEpi • 0

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3.8k

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install TxDb.Hsapiens.UCSC.hg38.knownGene

2.2 years ago Theresa ▴ 20

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2.8k

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TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene

updated 4.6 years ago by James W. MacDonald 65k • written 4.6 years ago by Aditya ▴ 160

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827

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HLA TxDb.Hsapiens.UCSC.hg38.knownGene

updated 4.3 years ago by kayla.interdonato ▴ 160 • written 4.3 years ago by Kamil Slowikowski ▴ 30

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1.0k

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TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene

updated 4.3 years ago by shepherl 3.9k • written 4.3 years ago by bernatgel ▴ 150

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.3 years ago by kayla.interdonato ▴ 160 • written 4.3 years ago by jam526 • 0

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1.7k

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.2 years ago by James W. MacDonald 65k • written 3.2 years ago by lukijanczukpawel • 0

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691

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microRNA TxDb.Hsapiens.UCSC.hg38.knownGene

16 months ago Lluís Revilla Sancho ▴ 730

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2.1k

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

5.0 years ago Ruichao.Zeng ▴ 20

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1.4k

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s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene

6.6 years ago Leonardo Collado Torres ★ 1.0k

14 results • Page 1 of 1

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Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Comment: maSigPro genes from clusters by anne-laure • 0

Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180