Bioconductor Txdb.hsapiens.ucsc.hg38.knowngene

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 12 days ago by James W. MacDonald 67k • written 12 days ago by linouhao ▴ 20

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2.2k

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MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation

22 months ago davidhillis • 0

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949

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microRNA TxDb.Hsapiens.UCSC.hg38.knownGene

2.0 years ago Lluís Revilla Sancho ▴ 760

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4.6k

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install TxDb.Hsapiens.UCSC.hg38.knownGene

2.9 years ago Theresa ▴ 20

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1.7k

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.1 years ago by Hervé Pagès 16k • written 3.1 years ago by BioEpi • 0

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2.2k

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.9 years ago by James W. MacDonald 67k • written 3.9 years ago by lukijanczukpawel • 0

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1.2k

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 5.0 years ago by kayla.interdonato ▴ 160 • written 5.0 years ago by jam526 • 0

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1.3k

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TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene

updated 5.0 years ago by shepherl 4.1k • written 5.0 years ago by bernatgel ▴ 150

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1.0k

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HLA TxDb.Hsapiens.UCSC.hg38.knownGene

updated 5.0 years ago by kayla.interdonato ▴ 160 • written 5.0 years ago by Kamil Slowikowski ▴ 30

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3.4k

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TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene

updated 5.3 years ago by James W. MacDonald 67k • written 5.3 years ago by Aditya ▴ 160

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2.5k

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

5.7 years ago Ruichao.Zeng ▴ 20

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3.4k

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txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db

updated 7.1 years ago by Simon Anders ★ 3.8k • written 7.1 years ago by Mark Dunning ★ 1.1k

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1.7k

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s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene

7.3 years ago Leonardo Collado Torres ★ 1.1k

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2.9k

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annotation txdb.hsapiens.ucsc.hg38.knowngene bug

8.3 years ago shilin.zhao ▴ 40

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3.9k

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txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation

8.8 years ago enricoferrero ▴ 660

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Answer: Postdoc/RA position: Software Engineer For R and High-Performance Computing by delhirussianescortscom • 0

Our escorts are well-groomed and well-trained to give you ultimate seduction and deep pleasure. If you're looking for hot Delhi air hostess…

Answer: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Following the discussion of this post, the package [gDNAx](https://bioconductor.org/packages/gDNAx) has been fixed in devel and release 1.4…

Answer: Selection of correct coefficients or contrasts in DESeq2 by James W. MacDonald 67k

Using R's model formulation for three-way interactions is probably not the way to go here. Or at least I wouldn't do it that way. An easier…

Comment: How to generate circular cnetplot and color nodes and edges in the same plot ? by Blandine • 0

Thank you so much ! It's working !

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by James W. MacDonald 67k

Yes. If you have the Illumina IDs, then all the annotation data that `cpg.annotate` uses will be based on hg19. It doesn't matter if TCGA l…

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