Bioconductor Txdb.hsapiens.ucsc.hg38.knowngene

Showing : txdb.hsapiens.ucsc.hg38.knowngene • reset

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719

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MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation

6 months ago davidhillis • 0

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368

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microRNA TxDb.Hsapiens.UCSC.hg38.knownGene

8 months ago Lluís Revilla Sancho ▴ 720

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2.8k

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install TxDb.Hsapiens.UCSC.hg38.knownGene

18 months ago Theresa ▴ 20

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1000

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 21 months ago by Hervé Pagès 16k • written 21 months ago by BioEpi • 0

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1.2k

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 2.6 years ago by James W. MacDonald 63k • written 2.6 years ago by lukijanczukpawel • 0

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726

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 3.6 years ago by kayla.interdonato 140 • written 3.6 years ago by jam526 • 0

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744

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TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.7 years ago by shepherl 3.5k • written 3.7 years ago by bernatgel ▴ 150

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622

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HLA TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.7 years ago by kayla.interdonato 140 • written 3.7 years ago by Kamil Slowikowski ▴ 30

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2.1k

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TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene

updated 3.9 years ago by James W. MacDonald 63k • written 3.9 years ago by Aditya ▴ 160

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

4.4 years ago Ruichao.Zeng ▴ 10

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2.3k

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txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db

updated 5.8 years ago by Simon Anders ★ 3.7k • written 5.8 years ago by Mark Dunning ★ 1.1k

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1.1k

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s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene

6.0 years ago Leonardo Collado Torres ★ 1.0k

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2.3k

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annotation txdb.hsapiens.ucsc.hg38.knowngene bug

6.9 years ago shilin.zhao ▴ 40

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3.2k

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txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation

7.4 years ago enricoferrero ▴ 660

14 results • Page 1 of 1

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Comment: List of Deprecated Packages for Bioc3.18 by Hervé Pagès 16k

Also the source package is not available [in BioC 3.17](https://bioconductor.org/packages/3.17/CancerInSilico) which means that the package…

Answer: DelayedArray::read_sparse_block by Hervé Pagès 16k

Hi Koki, Sorry again for the slow response. `read_sparse_block()` has been around for years. It's a generic function defined in the *…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Sorry for missing that one too. When writting blocks to an HDF5 file, the `write_block()` method for HDF5RealizationSink or TENxRealizatio…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Hi Koki, sorry for not seeing this before. > will SparseArraySeed in DelayedArray be replaced by this new sparse array format? Yes it wil…

Comment: Manual creation of qPCRset does not work by Ed Siefker ▴ 230

Thanks! This works for me.

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Comment: List of Deprecated Packages for Bioc3.18

Answer: Manual creation of qPCRset does not work

Answer: MDS plot edgeR

A: legend with gradient in ComplexHeatmap

Comment: comparing contrasts in edger/lima using makeContrasts function

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