Biostar TxDB.Hsapiens.UCSC.hg38.knownGene

Showing : TxDB.Hsapiens.UCSC.hg38.knownGene • reset

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215

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MetID TxDB.Hsapiens.UCSC.hg38.knownGene locateVariants GenomicFeatures VariantAnnotation

5 days ago • updated 1 day ago davidhillis • 0

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156

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microRNA TxDb.Hsapiens.UCSC.hg38.knownGene

10 weeks ago • updated 9 weeks ago Lluís Revilla Sancho ▴ 710

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1.5k

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install TxDb.Hsapiens.UCSC.hg38.knownGene

12 months ago Theresa ▴ 20

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747

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 15 months ago by Hervé Pagès 16k • written 15 months ago by BioEpi • 0

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860

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TxDb.Hsapiens.UCSC.hg38.knownGene

updated 2.1 years ago by James W. MacDonald 62k • written 2.1 years ago by lukijanczukpawel • 0

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582

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 3.1 years ago by kayla.interdonato 140 • written 3.1 years ago by jam526 • 0

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547

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TxDb annotation TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.2 years ago by shepherl 3.4k • written 3.2 years ago by bernatgel ▴ 150

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523

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HLA TxDb.Hsapiens.UCSC.hg38.knownGene

updated 3.2 years ago by kayla.interdonato 140 • written 3.2 years ago by Kamil Slowikowski ▴ 30

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1.7k

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TxDb.Hsapiens.UCSC.hg38.knownGene TxDb.Mmusculus.UCSC.mm10.ensGene

updated 3.4 years ago by James W. MacDonald 62k • written 3.4 years ago by Aditya ▴ 160

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1.4k

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

3.9 years ago Ruichao.Zeng ▴ 10

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2.0k

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txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db

updated 5.3 years ago by Simon Anders ★ 3.7k • written 5.3 years ago by Mark Dunning ★ 1.1k

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896

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s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene

5.5 years ago Leonardo Collado Torres ★ 1.0k

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2.0k

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annotation txdb.hsapiens.ucsc.hg38.knowngene bug

6.4 years ago shilin.zhao ▴ 40

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3.0k

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txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation

6.9 years ago enricoferrero ▴ 660

14 results • Page 1 of 1

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Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by tahir.msajid • 0

That's great. Thank you for clarifying the confusion. Cheers,

Comment: minfi support of illumina Infinium methylationEPIC v2.0 by luca.s ▴ 40

Tank you James. All fine, but for preprocessIllumina, which apparently won't work

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

As an exercise I've tried to analyze simpler but similar experiment. The data is from real experiment (E-MTAB-11224) comparing wild type an…

Answer: How to getting synonymous SNPs from BiomaRt before timing out? by James W. MacDonald 62k

Asking for multiple things at once will tend to blow out your results, as you will get every possible combination. ``` > options(timeou…

Comment: Definition of disease_subtype abbreviations by Lucas Schiffer ▴ 240

Hi Sehyun, I do not know myself and can only find one reference in the [template.csv](https://github.com/waldronlab/curatedMetagenomicDataC…

Votes

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Are polynomial contrasts for a time factor possible in DESeq2?

Are polynomial contrasts for a time factor possible in DESeq2?

Answer: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

Awards • All

Scholar to Gordon Smyth 47k

Popular Question to Robert Castelo ★ 3.0k