Showing : align • reset
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom Align MicroarrayData Alignment Microarray
2.6 years ago agamemnon • 0
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1.1k
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SUBREAD Aligning reads with reference genome - Error in align The number of input file names is different from the number of output file names.
align Alignment subread
3.5 years ago saira • 0
2
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2
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1.9k
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Rsubread doesn't output a .bai file
Rsubread align Alignment
updated 4.3 years ago by 53k • written 4.3 years ago by • 0
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5
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3.6k
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Error: Input Files have different Amount of Reads
SubRead Align Subjunc
updated 5.3 years ago by 68k • written 5.3 years ago by • 0
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4
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1.9k
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segfault "memory not mapped" using align from Rsubread
Rsubread align
5.5 years ago Joseph Fass ▴ 70
5
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6
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2.3k
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Rsubread malloc(): memory corruption
Rsubread malloc align
updated 6.0 years ago by 53k • written 6.1 years ago by ▴ 90
5
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6
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2.1k
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Improving the performance of the align function from Rsubread for old Roche454 reads
align rsubread roche454 rnaseq
updated 6.4 years ago by ★ 3.6k • written 6.5 years ago by ▴ 60
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9
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3.6k
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mapping FASTQ files to single gene (fluorescent reporter)
rsubread alignment align
6.8 years ago A ▴ 60
1
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5
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2.3k
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Error using Rsubread align: caugh segfault invalid permissions
rsubread align segfault
updated 9.4 years ago by ★ 3.6k • written 9.4 years ago by ▴ 10
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1
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2.0k
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RSubread 0% mapping
rsubread mapping featurecounts align
9.8 years ago Jo ▴ 30
10 results • Page 1 of 1
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Comment: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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