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align
•
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0
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0
replies
1.2k
views
Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
2.8 years ago
agamemnon
• 0
0
votes
0
replies
1.1k
views
SUBREAD Aligning reads with reference genome - Error in align The number of input file names is different from the number of output file names.
align
Alignment
subread
3.7 years ago
saira
• 0
2
votes
2
replies
2.0k
views
Rsubread doesn't output a .bai file
Rsubread
align
Alignment
updated 4.5 years ago by
Gordon Smyth
53k • written 4.5 years ago by
mike_flower
• 0
1
vote
5
replies
3.7k
views
Error: Input Files have different Amount of Reads
SubRead
Align
Subjunc
updated 5.4 years ago by
James W. MacDonald
68k • written 5.5 years ago by
abano
• 0
0
votes
4
replies
1.9k
views
segfault "memory not mapped" using align from Rsubread
Rsubread
align
5.7 years ago
Joseph Fass
▴ 70
5
votes
6
replies
2.4k
views
Rsubread malloc(): memory corruption
Rsubread
malloc
align
updated 6.1 years ago by
Gordon Smyth
53k • written 6.3 years ago by
Konstantinos Yeles
▴ 90
5
votes
6
replies
2.1k
views
Improving the performance of the align function from Rsubread for old Roche454 reads
align
rsubread
roche454
rnaseq
updated 6.6 years ago by
Wei Shi
★ 3.6k • written 6.7 years ago by
Raito92
▴ 60
0
votes
9
replies
3.7k
views
mapping FASTQ files to single gene (fluorescent reporter)
rsubread
alignment
align
7.0 years ago
A
▴ 60
1
vote
5
replies
2.3k
views
Error using Rsubread align: caugh segfault invalid permissions
rsubread
align
segfault
updated 9.6 years ago by
Wei Shi
★ 3.6k • written 9.6 years ago by
gerard_llimos
▴ 10
0
votes
1
reply
2.1k
views
RSubread 0% mapping
rsubread
mapping
featurecounts
align
10.0 years ago
Jo
▴ 30
10 results • Page
1 of 1
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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP
by
TikTsoksocissalpc
• 0
Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…
Comment: p.adjust BH Question
by
TikTsoksocissalpc
• 0
Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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