Bioconductor Align

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913

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Clariom Align MicroarrayData Alignment Microarray

2.1 years ago agamemnon • 0

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963

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align Alignment subread

3.0 years ago saira • 0

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1.8k

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Rsubread align Alignment

updated 3.7 years ago by Gordon Smyth 52k • written 3.7 years ago by mike_flower • 0

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SubRead Align Subjunc

updated 4.7 years ago by James W. MacDonald 68k • written 4.7 years ago by abano • 0

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1.7k

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Rsubread align

5.0 years ago Joseph Fass ▴ 70

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2.1k

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Rsubread malloc align

updated 5.4 years ago by Gordon Smyth 52k • written 5.6 years ago by Konstantinos Yeles ▴ 80

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1.9k

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align rsubread roche454 rnaseq

updated 5.9 years ago by Wei Shi ★ 3.6k • written 5.9 years ago by Raito92 ▴ 60

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3.3k

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rsubread alignment align

6.3 years ago A ▴ 60

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2.1k

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rsubread align segfault

updated 8.8 years ago by Wei Shi ★ 3.6k • written 8.8 years ago by gerard_llimos ▴ 10

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1.9k

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rsubread mapping featurecounts align

9.3 years ago Jo ▴ 30

10 results • Page 1 of 1

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Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k

If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …

Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

Votes

Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

A: Is logFC a log2 fold change or some other base in scran::findMarkers

Comment: Error in retrieving clinical data

What is the cheapest day to fly on American Airlines? {Ask_Expert}

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