Bioconductor Align

Showing : align • reset

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833

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Clariom Align MicroarrayData Alignment Microarray

21 months ago agamemnon • 0

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876

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align Alignment subread

2.6 years ago saira • 0

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1.6k

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Rsubread align Alignment

updated 3.4 years ago by Gordon Smyth 51k • written 3.4 years ago by mike_flower • 0

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SubRead Align Subjunc

updated 4.4 years ago by James W. MacDonald 67k • written 4.4 years ago by abano • 0

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1.5k

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Rsubread align

4.6 years ago Joseph Fass ▴ 70

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1.9k

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Rsubread malloc align

updated 5.1 years ago by Gordon Smyth 51k • written 5.2 years ago by Konstantinos Yeles ▴ 80

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1.7k

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align rsubread roche454 rnaseq

updated 5.6 years ago by Wei Shi ★ 3.6k • written 5.6 years ago by Raito92 ▴ 60

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3.0k

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rsubread alignment align

6.0 years ago A ▴ 40

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2.0k

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rsubread align segfault

updated 8.5 years ago by Wei Shi ★ 3.6k • written 8.5 years ago by gerard_llimos ▴ 10

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1.9k

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rsubread mapping featurecounts align

8.9 years ago Jo ▴ 30

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Comment: [How to construct a model.matrix ] by kyj2226 • 0

Thanks to you, I learn a lot. Many thanks, Yujin.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

thank you for your advice, I posted separate post.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k

Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…

Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k

DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…

Answer: [How to construct a model.matrix ] by Gordon Smyth 51k

> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…

Votes

Answer: [How to construct a model.matrix ]

C: DESeq2 baseMean values for each sample

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta

A: Some questions for remove batch effect by using mnnCorrect

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