Bioconductor AnnotationHub

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337

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 25 days ago by Tim Peters ▴ 180 • written 4 weeks ago by s.malik • 0

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340

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Atlanticsalmon clusterPro Salmosalar AnnotationHub GeneOntology

updated 9 weeks ago by Michael Love 41k • written 9 weeks ago by Filipe • 0

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170

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annotatr AnnotationHub

3 months ago hayleyw • 0

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1.2k

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clusterProfiler Annotationhub

updated 6 months ago by Guido Hooiveld ★ 3.9k • written 6 months ago by BS • 0

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4.9k

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BiocFileCache AnnotationHub ExperimentHub

6 months ago • updated 13 days ago shepherl 3.9k

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577

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tximeta AnnotationHub AnnotationHubData

6 months ago Thon • 0

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4.4k

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AnnotationHub AnnotationForge Pseudomonas_aeruginosa

updated 5 months ago by James W. MacDonald 65k • written 17 months ago by Manmohit ▴ 10

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5.8k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 7 weeks ago by shepherl 3.9k • written 2.3 years ago by jon.klonowski ▴ 40

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5.0k

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clusterProfiler AnnotationHub GO uniprot

updated 3 months ago by Guido Hooiveld ★ 3.9k • written 3.3 years ago by Alberto • 0

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5.6k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 4 weeks ago by Shiva • 0 • written 5.5 years ago by Guido Hooiveld ★ 3.9k

10 results • Page 1 of 1

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Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k